Genes & Genomes , Genomics , Transcriptomics Evolution biology Database Software tool Bgee Gene expression expertise
Genomics Systems Biology Database Software tool Progenetix Genomic profiles of cancer samples with focus on CNV
Population genetics Systems Biology Software tool CRUNCH Automated pipe-line for ChIP-seq data analysis
Proteins & Proteomes Systems Biology Database Software tool MetaNetX Metabolic network repository & analysis
Proteins & Proteomes Structural Biology , Medicinal chemistry , Structural analysis Software tool Click2Drug Directory of computational drug design tools
Proteins & Proteomes Database Software tool MyHits Relationships between protein sequences and motifs
Text mining & Machine learning Software tool Computational Linguistics for COVID-19 Central hub in computational linguistics for COVID-19
Genomics , Transcriptomics Software tool tromer Prediction of transcribed regions and splice junctions
Proteins & Proteomes Medicinal chemistry , Structural analysis Software tool SwissTargetPrediction Target prediction for bioactive small molecules
Proteins & Proteomes Systems Biology Database TCS Predict interaction specificity in bacterial signalling
Proteins & Proteomes Software tool Compute pI/MW Isoelectric point and molecular weight from protein sequence
Proteins & Proteomes Software tool UniProt BLAST BLAST sequence similarity search on the UniProt web site
Proteins & Proteomes Database UniProt SPARQL endpoint Query UniProt + related data in a powerful SQL-like language
Proteins & Proteomes Structural analysis Software tool OpenStructure Molecular modelling and visualisation environment
Proteins & Proteomes Structural Biology Database SWISS-MODEL Repository Protein structure homology models
Genomics Proteins & Proteomes Software tool SIB COVID-19 Integrated Knowledgebase Integrated data relevant for research on SARS-CoV-2
Genomics Evolution & Phylogeny Database Corona OMA Browser The OMA Browser, for 119 Nidovirales species
Proteins & Proteomes Software tool Myristoylator N-terminal myristoylation of proteins by neural networks.
Medicinal chemistry , Structural analysis Database SwissSidechain Database of non-natural amino acid side chains
Proteins & Proteomes Structural analysis Software tool Swiss-PdbViewer Display, analyse and superimpose protein 3D structures
Genes & Genomes Proteins & Proteomes Evolution & Phylogeny , Evolution biology Software tool OrthoLoger Accurate and scalable inference of groups of orthologs
Genes & Genomes Evolution & Phylogeny Software tool BEAST2 - COVID-19 Monitoring Epidemiological dynamics in real-time
Genes & Genomes Population genetics Software tool COVID-19 Scenarios Public health planning tool for COVID-19 outbreaks
Proteins & Proteomes Software tool ProtScale Profile produced by amino acids scales on protein sequences
Evolution & Phylogeny Database Software tool OMA SPARQL endpoint Orthology inference among complete genomes
Proteins & Proteomes Medicinal chemistry Software tool SwissADME Pharmacokinetics properties and druglikeness
Proteins & Proteomes Software tool pIcarver Theoretical distributions of peptide pI on a given pH range
Genomics Evolution biology , Population genetics Software tool fastsimcoal Fast sequential Markov coalescent simulation of genomic data
Proteins & Proteomes Database World-2DPAGE Constellation Entry point to 2D page analysis tools and databases
Population genetics Software tool Arlequin An integrated software for population genetics data analysis
Genes & Genomes , Genomics Systems Biology Database Software tool iPtgxDBs Platform for integrated proteogenomics databases
Proteins & Proteomes Glycomics Database Software tool GlyConnect Integrated data platform to study glycosylation
Genes & Genomes Database Software tool SPSP | Swiss Pathogen Surveillance Platform A secure NGS One-health online platform
Genomics Systems Biology Database Software tool arrayMAP Curated array data repository for cancer genomics
Proteins & Proteomes Metabolomics Software tool rawrr R package for fast reading Thermo Fisher Scientific MS data.
Genomics Proteins & Proteomes Structural analysis Software tool COILS Prediction of coiled coil regions in proteins
Genomics , Metagenomics , Transcriptomics Population genetics Software tool mOTUs Microbial abundance and population genomic profiler
Transcriptomics Population genetics Software tool V-pipe SARS-CoV-2 V-pipe pipeline applied to SARS-CoV-2 sequencing data
Evolution biology Software tool Nextstrain Impact of pathogen genome data on science and public health
Proteins & Proteomes Structural Biology , Structural analysis Software tool SWISS-MODEL Workspace Fully automated protein structure homology-modeling server
Proteins & Proteomes Medicinal chemistry , Structural analysis Database SwissBioIsostere Database of molecular replacements for ligand design
Genes & Genomes , Genomics , Transcriptomics Evolution biology Database Software tool Bgee SPARQL endpoint Gene expression expertise
Proteins & Proteomes Database World-2DPAGE Repository Repository for published gel-based proteomics data
Genomics , Transcriptomics Software tool ASAP Web-based, cooperative portal for single-cell data analyses
Proteins & Proteomes Database HAMAP SPARQL endpoint Use HAMAP + SPARQL to generate portable annotation pipelines
Proteins & Proteomes Structural analysis Software tool MARCOIL Coiled-coil regions in protein sequences
Proteins & Proteomes Structural analysis Software tool TMPred Prediction of trans-membrane regions in protein sequences
Text mining & Machine learning Software tool CovidTriage Rank the COVID-19 literature according to COVoc ontology
Genomics , Transcriptomics Systems Biology Database SwissRegulon Database of genome-wide annotations of regulatory sites
Proteins & Proteomes Glycomics Software tool GlycoSiteAlign Multiple alignment of sequences around glycosylation sites
Proteins & Proteomes Medicinal chemistry , Structural analysis Software tool SwissParam Topology and parameters for small molecules
Proteins & Proteomes Glycomics Software tool GlycoMod Possible oligosaccharide structures on proteins from masses
Proteins & Proteomes Glycomics Database UniLectin Structural and functional classification of lectins
Proteins & Proteomes Glycomics Software tool Swiss Mass Abacus Intuitive calculator of peptide and glycopeptide masses
Evolution & Phylogeny Database OrthoDB SPARQL endpoint Evolutionary and functional annotations of orthologs
Genomics , Transcriptomics Proteins & Proteomes Software tool Translate Nucleotide sequence to a protein sequence
Genomics , Transcriptomics Proteins & Proteomes Systems Biology Software tool ISMARA Genome-wide annotations of regulatory sites
Genomics Evolution & Phylogeny Software tool Newick Utilities High-throughput phylogenetic tree processing
Text mining & Machine learning Database Software tool SIBiLS Personalized Information Retrieval in biomedical literature
Proteins & Proteomes Software tool neXtProt SPARQL endpoint SPARQL endpoint for the neXtProt Human protein knowledgebase
Proteins & Proteomes Structural Biology , Medicinal chemistry Software tool SwissDock Docking of small ligands into protein active sites