OrthoLoger

  • Genes & Genomes
  • Proteins & Proteomes
  • Evolution & Phylogeny
  • Software tool
This software, used to delineate orthologs in OrthoDB, is freely available for standalone computations (see more from https://www.orthodb.org/orthodb_userguide.html#standalone-orthologer-software). It is based on pair-wise assessments of protein sequence homology between complete genomes and subsequent clustering. Orthologer includes an optional mode to perform hierarchical computation of orthology guided by a user-provided organism taxonomy.
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