HAMAP SPARQL endpoint

  • Proteins & Proteomes
  • Database
A SPARQL endpoint using the annotation rules from the HAMAP protein classification and annotation system, which can be used to automatically generate Swiss-Prot style annotation, based on protein family membership. HAMAP rules have been translated into queries in the W3C standard SPARQL 1.1 syntax, and can be used to generate portable genome and proteome annotation pipelines, to be run without recourse to custom software. See https://academic.oup.com/gigascience/article/9/2/giaa003/5731417
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