UniProt SPARQL endpoint

  • Proteins & Proteomes
  • Database
Use SPARQL to express queries across diverse data sources, such as UniProt and its supporting datasets as well as other databases that provide this technology. This allows powerful queries as if the queried databases were installed locally.

💡 The world's largest public SPARQL endpoint with 190 billion triples.

You might also be interested in

      • Genes & Genomes
      • Proteins & Proteomes
      • Structural Biology
      • Database

    ViralZone

    Factsheets about viruses linked to sequence databases
      • Evolution & Phylogeny
      • Database

    OrthoDB

    Ortholog evolutionary and functional annotations
      • Proteins & Proteomes
      • Database

    UniProtKB

    Protein sequence database
      • Proteins & Proteomes
      • Software tool

    HAMAP-Scan

    Scanning of protein sequences against HAMAP families
      • Genomics
      • Database

    TASmania

    Toxin-antitoxin database
      • Genomics
      • Software tool

    TASer

    Search tool associated to TASmania
      • Proteins & Proteomes
      • Software tool

    ScanProsite

    Protein sequences against PROSITE
      • Evolution & Phylogeny
      • Software tool

    OrthoLoger

    Accurate and scalable inference of groups of orthologs
      • Evolution & Phylogeny
      • Database
      • Software tool

    OMA

    Orthology inference among complete genomes
      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    STRING

    Protein-protein interaction networks and enrichment analysis
      • Proteins & Proteomes
      • Lipidomics
      • Database

    SwissLipids

    Knowledge resource for lipids
      • Proteins & Proteomes
      • Metabolomics
      • Database

    Rhea

    Expert-curated database of biochemical reactions
      • Proteins & Proteomes
      • Database

    ENZYME

    Enzyme nomenclature database
      • Glycomics
      • Software tool

    HMO-Glycologue

    Simulator of Human Milk Oligosaccharide synthesis
      • Systems Biology
      • Software tool

    OMAMO

    OMAMO allows the user to find the best simple model organism
      • Proteins & Proteomes
      • Systems Biology
      • Database

    TCS

    Predict interaction specificity in bacterial signalling
      • Proteins & Proteomes
      • Glycomics
      • Database

    MatrixDB

    Extracellular proteins and polysaccharides interactions
      • Proteins & Proteomes
      • Metabolomics
      • Database
      • Software tool

    MetaNetX

    Metabolic network repository & analysis
      • Transcriptomics
      • Systems Biology
      • Software tool

    Bonsai

    Analysis of single cell RNA-seq data
      • Evolution biology
      • Systems Biology
      • Database

    MoultDB

    Integrative resource on moulting in arthropods
      • Transcriptomics
      • Proteins & Proteomes
      • Systems Biology
      • Software tool

    NOODAI

    Multi-omics data analysis and integration
      • Transcriptomics
      • Evolution & Phylogeny
      • Systems Biology
      • Database
      • Software tool

    SwissRegulon Portal

    Tools and data for regulatory genomics
      • Genes & Genomes
      • Systems Biology
      • Software tool

    CREMA

    Cis-Regulatory Element Motif Activities
      • Transcriptomics
      • Systems Biology
      • Software tool

    CRUNCH

    Automated pipeline for ChIP-seq data analysis
      • Transcriptomics
      • Database

    PolyAsite

    Database of curated RNA polyadenylation sites
      • Genomics
      • Database
      • Software tool

    EPD

    Eukaryotic Promoter Database
      • Transcriptomics
      • Database
      • Software tool

    ASAP

    Web-based, cooperative portal for single-cell data analyses
      • Systems Biology
      • Database

    Cellosaurus

    Knowledge resource on cell lines
      • Transcriptomics
      • Evolution biology
      • Database
      • Software tool

    Bgee

    Gene expression expertise
      • Transcriptomics
      • Evolution biology
      • Database

    Bgee SPARQL endpoint

    SPARQL access to the Bgee gene expression database
      • Proteins & Proteomes
      • Glycomics
      • Database

    GlyConnect

    Integrated data platform to study glycosylation
      • Proteins & Proteomes
      • Glycomics
      • Database

    UniLectin

    Structural and functional classification of lectins
      • Transcriptomics
      • Systems Biology
      • Database

    SwissRegulon

    Database of genome-wide annotations of regulatory sites
      • Proteins & Proteomes
      • Database
      • Software tool

    PaxDb

    Protein abundance across several organisms
      • Genes & Genomes
      • Evolution & Phylogeny
      • Database
      • Software tool

    SwissOrthology

    One-stop shop for orthologs
      • Structural Biology
      • Database

    ModelArchive

    Repository of predicted macromolecular structure models
      • Transcriptomics
      • Software tool

    miRmap

    Prediction of microRNA target repression strength
      • Genomics
      • Evolution biology
      • Database

    Selectome

    Database of positive selection
      • Proteins & Proteomes
      • Database

    ABCD

    Database of chemically defined antibodies
      • Transcriptomics
      • Software tool

    TagScan

    Genome-wide sequence tag scanner
      • Transcriptomics
      • Database
      • Software tool

    Fly Cell Atlas

    Single-cell transcriptomes of the entire adult Drosophila
      • Genes & Genomes
      • Proteins & Proteomes
      • Software tool

    MetaGraph

    Petabase-scale sequence search
      • Proteins & Proteomes
      • Evolution & Phylogeny
      • Database
      • Software tool

    Orthology Benchmarking

    Quest for Orthologs benchmarking service
      • Proteins & Proteomes
      • Database
      • Software tool

    neXtProt

    Human protein knowledgebase
      • Systems Biology
      • Software tool

    CLASTR

    Cellosaurus STR similarity search tool
      • Proteins & Proteomes
      • Structural analysis
      • Software tool

    SwissTargetPrediction

    Target prediction for bioactive small molecules
      • Genes & Genomes
      • Systems Biology
      • Database

    cancercelllines.org

    Genomic variants in human cancer cell lines
      • Genomics
      • Systems Biology
      • Database

    arrayMAP

    Curated array data repository for cancer genomics
      • Proteins & Proteomes
      • Glycomics
      • Database

    SugarBind

    Pathogen Sugar-Binding Database
      • Genomics
      • Database
      • Software tool

    SNP2TFBS

    Regulatory SNPs affecting TF binding site affinity
      • Genes & Genomes
      • Systems Biology
      • Database

    Progenetix

    Genomic profiles of cancer samples with focus on CNV
      • Structural Biology
      • Glycomics
      • Database

    UniCarb-DB

    Glycan structures and associated mass spectrometry data
      • Text mining & Machine learning
      • Software tool

    Variomes

    Search engine to support the curation of genomic variants
      • Transcriptomics
      • Database
      • Software tool

    Human Cell Atlas

    Mapping the human body at the cellular level
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    GlycoSiteAlign

    Multiple alignment of sequences around glycosylation sites
      • Proteins & Proteomes
      • Software tool

    PRATT

    Conserved patterns in a set of protein sequences
      • Proteins & Proteomes
      • Database
      • Software tool

    HAMAP

    UniProtKB family classification and annotation
      • Proteins & Proteomes
      • Database

    PROSITE

    Protein family and domain database
      • Proteins & Proteomes
      • Text mining & Machine learning
      • Database

    MHC Motif Atlas

    MHC Motif Atlas
      • Proteins & Proteomes
      • Glycomics
      • Database
      • Software tool

    Glyco@Expasy

    Zooming in on web-based glycoinformatics resources
      • Proteins & Proteomes
      • Software tool

    MyDomains

    Protein domains image creator