Proteins & Proteomes Structural Biology Database SWISS-MODEL Repository Protein structure homology models
Genes & Genomes Proteins & Proteomes Structural Biology Database ViralZone Fact sheets about viruses linked to sequence databases
Proteins & Proteomes Systems Biology Database Software tool STRING Protein-protein interaction networks and enrichment analysis
Population genetics Software tool Arlequin An integrated software for population genetics data analysis
Proteins & Proteomes Glycomics Database UniLectin Structural and functional classification of lectins
Proteins & Proteomes Structural analysis Software tool SwissTargetPrediction Target prediction for bioactive small molecules
Transcriptomics Systems Biology Database SwissRegulon Database of genome-wide annotations of regulatory sites
Proteins & Proteomes Structural analysis Database SwissBioIsostere Database of molecular replacements for ligand design
Genes & Genomes Evolution & Phylogeny Software tool REALPHY Inference of phylogenetic trees from genome data
Genomics Systems Biology Database Software tool Progenetix Genomic profiles of cancer samples with focus on CNV
Genomics Systems Biology Database Software tool arrayMAP Curated array data repository for cancer genomics
Metagenomics Population genetics Database Software tool mOTUs Microbial taxonomic and population genomic profiler
Genomics Systems Biology Database Software tool iPtgxDBs Platform for integrated proteogenomics databases
Proteins & Proteomes Glycomics Software tool GlycoSiteAlign Multiple alignment of sequences around glycosylation sites
Genomics Population genetics Software tool fastsimcoal Fast sequential Markov coalescent simulation of genomic data
Transcriptomics Proteins & Proteomes Software tool Translate Convert a nucleotide sequence to a protein sequence
Proteins & Proteomes Software tool ProtScale Profile produced by amino acids scales on protein sequences
Proteins & Proteomes Software tool Myristoylator N-terminal myristoylation of proteins by neural networks
Proteins & Proteomes Glycomics Software tool GlycoMod Possible oligosaccharide structures on proteins from masses
Proteins & Proteomes Software tool Compute pI/MW Isoelectric point and molecular weight from protein sequence
Proteins & Proteomes Software tool UniProt BLAST BLAST sequence similarity search on the UniProt web site
Proteins & Proteomes Structural analysis Software tool SWISS-MODEL Workspace Fully automated protein structure homology-modeling server
Proteins & Proteomes Systems Biology Database TCS Predict interaction specificity in bacterial signalling
Transcriptomics Systems Biology Software tool ISMARA Webservice for gene expression and epigenetic data analysis
Genes & Genomes Evolution & Phylogeny Database Software tool SwissOrthology One-stop shop for orthologs
Medicinal chemistry Database Software tool SwissDrugDesign Widening access to computer-aided drug design
Transcriptomics Evolution & Phylogeny Systems Biology Database Software tool SwissRegulon Portal Tools and data for regulatory genomics
Genomics Population genetics Software tool V-pipe SARS-CoV-2 V-pipe pipeline for SARS-CoV-2 sequencing data
Transcriptomics Evolution biology Database Bgee SPARQL endpoint SPARQL access to the Bgee gene expression database
Evolution & Phylogeny Database OrthoDB SPARQL endpoint SPARQL access to the OrthoDB catalog of orthologs
Evolution & Phylogeny Software tool OrthoLoger Accurate and scalable inference of groups of orthologs
Proteins & Proteomes Metabolomics Software tool rawrr R package for fast reading Thermo Fisher Scientific MS data
Genes & Genomes Database Software tool SPSP | Swiss Pathogen Surveillance Platform Public Swiss pathogen NGS data
Proteins & Proteomes Glycomics Database Glyco@Expasy Zooming in on web-based glycoinformatics resources
Text mining & Machine learning Software tool Variomes Search engine to support the curation of genomic variants
Genomics Evolution & Phylogeny Software tool Nextclade Clade assignment, mutation calling & QC for virus sequences
Proteins & Proteomes Lipidomics Database SwissLipids SPARQL endpoint SPARQL access to the SwissLipids knowledgebase
Genomics Text mining & Machine learning Database cancercelllines.org Genomic variants in human cancer cell lines
Transcriptomics Systems Biology Software tool DWT-online Dinucleotide Weight Tensor toolbox and visualisation service
Genes & Genomes Evolution biology Software tool BEAST2 Bayesian evolutionary analysis by sampling trees
Proteins & Proteomes Systems Biology Database Protein Universe Atlas Interactive, annotated similarity network of all proteins
Proteins & Proteomes Glycomics Database MatrixDB Extracellular proteins and polysaccharides interactions