Search results: database and tool description

48 resources found for Computational biology

      • Proteins & Proteomes
      • Database

    UniProtKB

    Protein sequence database
      • Proteins & Proteomes
      • Database

    ENZYME

    Enzyme nomenclature database
      • Genes & Genomes
      • Proteins & Proteomes
      • Structural Biology
      • Database

    ViralZone

    Fact sheets about viruses linked to sequence databases
      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    STRING

    Protein-protein interaction networks and enrichment analysis
      • Evolution & Phylogeny
      • Database

    OrthoDB

    Ortholog evolutionary and functional annotations
      • Evolution & Phylogeny
      • Database
      • Software tool

    OMA

    Orthology inference among complete genomes
      • Proteins & Proteomes
      • Lipidomics
      • Database

    SwissLipids

    Knowledge resource for lipids
      • Proteins & Proteomes
      • Metabolomics
      • Database
      • Software tool

    MetaNetX

    Metabolic network repository & analysis
      • Genomics
      • Population genetics
      • Software tool

    V-pipe

    Viral genomics pipeline
      • Genomics
      • Software tool

    TagScan

    Genome-wide sequence tag scanner
      • Transcriptomics
      • Software tool

    SIBsim4

    Align expressed RNA sequences on a DNA template
      • Genomics
      • Software tool

    ShoRAH

    Analysis of NGS data
      • Genes & Genomes
      • Evolution & Phylogeny
      • Software tool

    REALPHY

    Inference of phylogenetic trees from genome data
      • Transcriptomics
      • Software tool

    QuasR

    Quantification and analysis of Short Reads
      • Proteins & Proteomes
      • Software tool

    pftools

    Build, calibrate, and search biological sequences
      • Genomics
      • Evolution biology
      • Software tool

    Nextstrain

    Impact of pathogen genome data on science and public health
      • Glycomics
      • Software tool

    Glydin'

    Network representation of known glycan determinants
      • Genomics
      • Software tool

    FastEpistasis

    Tool for quantitative trait epistasis
      • Proteins & Proteomes
      • Metabolomics
      • Database

    Rhea

    Expert-curated database of biochemical reactions
      • Proteins & Proteomes
      • Software tool

    HAMAP-Scan

    Scanning of protein sequences against HAMAP families
      • Proteins & Proteomes
      • Software tool

    UniProt BLAST

    BLAST sequence similarity search on the UniProt web site
      • Proteins & Proteomes
      • Software tool

    Dotlet

    Regions of close similarity in 2 sequences
      • Proteins & Proteomes
      • Systems Biology
      • Database

    TCS

    Predict interaction specificity in bacterial signalling
      • Genomics
      • Evolution biology
      • Software tool

    CT-CBN

    Estimate conjunctive Bayesian networks
      • Transcriptomics
      • Software tool

    ISA

    Finding modules in gene expression data
      • Transcriptomics
      • Software tool

    ExpressionView

    Biclusters identified in gene expression data
      • Proteins & Proteomes
      • Software tool

    ScanProsite

    Protein sequences against PROSITE
      • Transcriptomics
      • Evolution & Phylogeny
      • Systems Biology
      • Database
      • Software tool

    SwissRegulon Portal

    Tools and data for regulatory genomics
      • Genomics
      • Population genetics
      • Software tool

    V-pipe SARS-CoV-2

    V-pipe pipeline for SARS-CoV-2 sequencing data
      • Genomics
      • Database

    TASmania

    Toxin-antitoxin database
      • Genomics
      • Software tool

    TASer

    Search tool associated to TASmania
      • Evolution & Phylogeny
      • Software tool

    OrthoLoger

    Accurate and scalable inference of groups of orthologs
      • Glycomics
      • Software tool

    HMO-Glycologue

    Simulator of Human Milk Oligosaccharide synthesis
      • Metagenomics
      • Software tool

    mVIRs

    Prediction tool for inducible, bacteria-infecting viruses
      • Systems Biology
      • Software tool

    OMAMO

    OMAMO allows the user to find the best simple model organism
      • Genomics
      • Evolution & Phylogeny
      • Software tool

    Nextclade

    Clade assignment, mutation calling & QC for virus sequences
      • Evolution biology
      • Software tool

    CAPTAIN

    Decision-support tool for conservation area prioritization
      • Transcriptomics
      • Database

    Glittr

    Git repositories with bioinformatics training material
      • Genes & Genomes
      • Evolution biology
      • Software tool

    BEAST2

    Bayesian evolutionary analysis by sampling trees
      • Proteins & Proteomes
      • Systems Biology
      • Database

    Protein Universe Atlas

    Interactive, annotated similarity network of all proteins
      • Proteins & Proteomes
      • Glycomics
      • Database

    MatrixDB

    Extracellular proteins and polysaccharides interactions