Structural Biology

SWISS-MODEL Repository

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Protein structure homology models

ModelArchive

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Repository of predicted macromolecular structure models

SwissDock

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Docking of small ligands into protein active sites

System Biology

MetaNetX

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Metabolic network repository & analysis

Cellosaurus

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Knowledge resource on cell lines

Genes & Genomes

Bgee

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Gene expression expertise

Evolution & Phylogeny

OMA

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Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

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Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

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Protein-protein interaction networks and enrichment analysis

UniProtKB

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Protein sequence database

ViralZone

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Factsheets about viruses linked to sequence databases

ENZYME

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Enzyme nomenclature database

HAMAP

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UniProtKB family classification and annotation

SwissLipids

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Knowledge resource for lipids

VenomZone

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Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins
Search results: database and tool description

39 resources found for Report

      • Proteins & Proteomes
      • Database

    PROSITE

    Protein family and domain database
      • Proteins & Proteomes
      • Database
      • Software tool

    HAMAP

    UniProtKB family classification and annotation
      • Proteins & Proteomes
      • Database

    VenomZone

    Portal to venom protein UniProtKB entries
      • Systems Biology
      • Database

    Cellosaurus

    Knowledge resource on cell lines
      • Proteins & Proteomes
      • Structural analysis
      • Software tool

    SwissTargetPrediction

    Target prediction for bioactive small molecules
      • Proteins & Proteomes
      • Structural analysis
      • Database

    SwissBioIsostere

    Database of molecular replacements for ligand design
      • Medicinal chemistry
      • Software tool

    SwissADME

    Pharmacokinetics properties and druglikeness
      • Transcriptomics
      • Software tool

    QuasR

    Quantification and analysis of Short Reads
      • Proteins & Proteomes
      • Structural analysis
      • Software tool

    QMEAN

    Protein model quality estimation
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    GlycoSiteAlign

    Multiple alignment of sequences around glycosylation sites
      • Proteins & Proteomes
      • Glycomics
      • Database

    GlyConnect

    Integrated data platform to study glycosylation
      • Proteins & Proteomes
      • Software tool

    ProtParam

    Computation of physico chemical parameters of a protein
      • Proteins & Proteomes
      • Software tool

    PRATT

    Conserved patterns in a set of protein sequences
      • Proteins & Proteomes
      • Software tool

    Dotlet

    Regions of close similarity in 2 sequences
      • Proteins & Proteomes
      • Structural analysis
      • Software tool

    SWISS-MODEL Workspace

    Fully automated protein structure homology-modeling server
      • Transcriptomics
      • Systems Biology
      • Software tool

    ISMARA

    Webservice for gene expression and epigenetic data analysis
      • Proteins & Proteomes
      • Software tool

    ScanProsite

    Protein sequences against PROSITE
      • Medicinal chemistry
      • Database
      • Software tool

    SwissDrugDesign

    Widening access to computer-aided drug design
      • Transcriptomics
      • Database
      • Software tool

    ASAP

    Web-based, cooperative portal for single-cell data analyses
      • Text mining & Machine learning
      • Database
      • Software tool

    SIBiLS

    Personalized information retrieval from the literature
      • Text mining & Machine learning
      • Software tool

    Variomes

    Search engine to support the curation of genomic variants
      • Structural Biology
      • Database

    ModelArchive

    Repository of predicted macromolecular structure models
      • Proteins & Proteomes
      • Structural Biology
      • Database
      • Software tool

    CAMEO

    Weekly automated benchmarking of protein structure modelling
      • Genes & Genomes
      • Systems Biology
      • Database

    cancercelllines.org

    Genomic variants in human cancer cell lines
      • Genes & Genomes
      • Systems Biology
      • Software tool

    CREMA

    Cis-Regulatory Element Motif Activities
      • Proteins & Proteomes
      • Software tool

    OMArk

    OMArk determines the quality and completeness of gene sets
      • Text mining & Machine learning
      • Software tool

    BiotXplorer

    Biotic interactions from scientific publications
      • Text mining & Machine learning
      • Software tool

    Biodiversity PMC

    Search a large collection of scientific publications
      • Transcriptomics
      • Systems Biology
      • Software tool

    Cellstates

    Infering clusters of cells in scRNA-seq data
      • Transcriptomics
      • Systems Biology
      • Software tool

    Sanity

    Single-cell RNA-Seq normalization method
      • Transcriptomics
      • Systems Biology
      • Software tool

    Bonsai

    Analysis of single cell RNA-seq data
      • Metagenomics
      • Software tool

    MAGFlow/BIgMAG

    Metagenome metrics and taxonomical annotation visualization
      • Transcriptomics
      • Database
      • Software tool

    Fly Cell Atlas

    Single-cell transcriptomes of the entire adult Drosophila
      • Transcriptomics
      • Database
      • Software tool

    Human Cell Atlas

    Mapping the human body at the cellular level
      • Metagenomics
      • Database

    BeeBiome

    Bee-associated microbes/viruses
      • Transcriptomics
      • Proteins & Proteomes
      • Systems Biology
      • Software tool

    NOODAI

    Multi-omics data analysis and integration
      • Proteins & Proteomes
      • Evolution & Phylogeny
      • Database
      • Software tool

    Orthology Benchmarking

    Quest for Orthologs benchmarking service