29 resources found for systems biology

• • • Proteins & Proteomes
  • • Systems Biology

  • • Database
  • • Software tool

  STRING

  Protein-protein interaction networks and enrichment analysis
• • • Proteins & Proteomes
  • • Metabolomics

  • • Database
  • • Software tool

  MetaNetX

  Metabolic network repository & analysis
• • • Systems Biology

  • • Database

  Cellosaurus

  Knowledge resource on cell lines
• • • Transcriptomics
  • • Systems Biology

  • • Database

  SwissRegulon

  Database of genome-wide annotations of regulatory sites
• • • Genes & Genomes
  • • Evolution & Phylogeny

  • • Software tool

  REALPHY

  Inference of phylogenetic trees from genome data
• • • Genomics
  • • Systems Biology

  • • Database
  • • Software tool

  Progenetix

  Genomic profiles of cancer samples with focus on CNV
• • • Proteins & Proteomes

  • • Database
  • • Software tool

  PaxDb

  Protein abundance across several organisms
• • • Genomics
  • • Systems Biology

  • • Database
  • • Software tool

  arrayMAP

  Curated array data repository for cancer genomics
• • • Genomics

  • • Software tool

  IScan

  Insertion sequence identification in whole genomes
• • • Genomics
  • • Systems Biology

  • • Database
  • • Software tool

  iPtgxDBs

  Platform for integrated proteogenomics databases
• • • Systems Biology

  • • Software tool

  Genome History

  Gene duplicate identification
• • • Proteins & Proteomes
  • • Metabolomics

  • • Database

  Rhea

  Expert-curated database of biochemical reactions
• • • Transcriptomics
  • • Systems Biology

  • • Software tool

  CRUNCH

  Automated pipeline for ChIP-seq data analysis
• • • Systems Biology

  • • Software tool

  CLASTR

  Cellosaurus STR similarity search tool
• • • Proteins & Proteomes
  • • Systems Biology

  • • Database

  TCS

  Predict interaction specificity in bacterial signalling
• • • Transcriptomics
  • • Systems Biology

  • • Software tool

  ISMARA

  Webservice for gene expression and epigenetic data analysis
• • • Genomics
  • • Systems Biology

  • • Software tool

  Phylogibbs

  Regulatory sites in a collection of DNA sequences
• • • Transcriptomics
  • • Evolution & Phylogeny
  • • Systems Biology

  • • Database
  • • Software tool

  SwissRegulon Portal

  Tools and data for regulatory genomics
• • • Transcriptomics

  • • Software tool

  ASAP

  Web-based, cooperative portal for single-cell data analyses
• • • Proteins & Proteomes
  • • Metabolomics

  • • Database

  Rhea SPARQL endpoint

  SPARQL access to the Rhea knowledgebase
• • • Systems Biology

  • • Software tool

  OMAMO

  OMAMO allows the user to find the best simple model organism
• • • Proteins & Proteomes
  • • Metabolomics

  • • Database

  MetaNetX SPARQL endpoint

  SPARQL access to MetaNetX
• • • Systems Biology

  • • Database

  SwissBioPics

  Subcellular location visualization
• • • Genes & Genomes
  • • Systems Biology

  • • Software tool

  CREMA

  Cis-Regulatory Element Motif Activities
• • • Transcriptomics
  • • Systems Biology

  • • Software tool

  DWT-online

  Dinucleotide Weight Tensor toolbox and visualisation service
• • • Systems Biology

  • • Database

  Cellosaurus SPARQL endpoint

  SPARQL access to Cellosaurus
• • • Proteins & Proteomes
  • • Systems Biology

  • • Database

  Protein Universe Atlas

  Interactive, annotated similarity network of all proteins
• • • Transcriptomics
  • • Systems Biology

  • • Software tool

  Cellstates

  Infering clusters of cells in scRNA-seq data
• • • Transcriptomics
  • • Systems Biology

  • • Software tool

  Sanity

  Single-cell RNA-Seq normalization method