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- Proteins & Proteomes
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- Database
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- Software tool
HAMAP
UniProtKB family classification and annotation
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Factsheets about viruses linked to sequence databases
Enzyme nomenclature database
Search results: database and tool description
26 resources found for sequences
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- Transcriptomics
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- Software tool
TagScan
Genome-wide sequence tag scanner -
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- Genomics
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- Software tool
SSA
Analysis of nucleic acid sequence motifs -
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- Transcriptomics
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- Software tool
SIBsim4
Align expressed RNA sequences on a DNA template -
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- Genes & Genomes
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- Evolution & Phylogeny
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- Software tool
REALPHY
Inference of phylogenetic trees from genome data -
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- Proteins & Proteomes
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- Software tool
pftools
Build, calibrate, and search biological sequences -
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- Metagenomics
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- Population genetics
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- Database
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- Software tool
mOTUs
Microbial taxonomic and population genomic profiler -
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- Genomics
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- Software tool
IScan
Insertion sequence identification in whole genomes -
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- Proteins & Proteomes
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- Glycomics
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- Software tool
GlycoSiteAlign
Multiple alignment of sequences around glycosylation sites -
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- Proteins & Proteomes
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- Software tool
Sulfinator
Predict tyrosine sulfation sites in protein sequences -
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- Proteins & Proteomes
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- Software tool
SIM
Alignment of two protein sequences or within a sequence -
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- Proteins & Proteomes
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- Software tool
ProtScale
Profile produced by amino acids scales on protein sequences -
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- Proteins & Proteomes
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- Software tool
PRATT
Conserved patterns in a set of protein sequences -
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- Proteins & Proteomes
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- Text mining & Machine learning
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- Software tool
Myristoylator
N-terminal myristoylation of proteins by neural networks -
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- Proteins & Proteomes
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- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families -
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- Proteins & Proteomes
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- Software tool
Decrease redundancy
Redundancy reduction in a set of sequences -
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- Proteins & Proteomes
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- Software tool
Compute pI/MW
Isoelectric point and molecular weight from protein sequence -
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- Proteins & Proteomes
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- Software tool
UniProt ClustalO
Align two or more protein sequences -
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- Proteins & Proteomes
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- Software tool
Dotlet
Regions of close similarity in 2 sequences -
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- Proteins & Proteomes
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- Systems Biology
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- Database
TCS
Predict interaction specificity in bacterial signalling -
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- Genomics
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- Systems Biology
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- Software tool
Phylogibbs
Regulatory sites in a collection of DNA sequences -
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- Proteins & Proteomes
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- Software tool
ScanProsite
Protein sequences against PROSITE -
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- Genes & Genomes
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- Database
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- Software tool
SPSP | Swiss Pathogen Surveillance Platform
Public Swiss pathogen NGS data -
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences -
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- Transcriptomics
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- Systems Biology
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- Software tool
DWT-online
Dinucleotide Weight Tensor toolbox and visualisation service -
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- Genes & Genomes
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- Proteins & Proteomes
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- Software tool
MetaGraph
Petabase-scale sequence search -