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- Genomics
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- Population genetics
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- Software tool
V-pipe
Viral genomics pipeline
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Fact sheets about viruses linked to sequence databases
Enzyme nomenclature database
UniProtKB family classification and annotation
Relationships between protein sequences and motifs
Knowledge resource for lipids
Portal to venom protein UniProtKB entries
Interactive, annotated similarity network of all proteins
Search results: database and tool description
19 resources found for Nucleic acid sequence analysis
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- Population genetics
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- Software tool
Arlequin
An integrated software for population genetics data analysis -
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- Genomics
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- Software tool
ShoRAH
Analysis of NGS data -
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- Genomics
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- Systems Biology
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- Database
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- Software tool
Progenetix
Genomic profiles of cancer samples with focus on CNV -
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- Genomics
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- Systems Biology
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- Database
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- Software tool
arrayMAP
Curated array data repository for cancer genomics -
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- Metagenomics
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- Population genetics
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- Database
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- Software tool
mOTUs
Microbial taxonomic and population genomic profiler -
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- Genomics
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- Software tool
IScan
Insertion sequence identification in whole genomes -
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- Systems Biology
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- Software tool
Genome History
Gene duplicate identification -
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- Transcriptomics
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- Evolution biology
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- Software tool
BUSCO
From QC to gene prediction and phylogenomics -
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- Transcriptomics
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- Systems Biology
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- Software tool
ISMARA
Webservice for gene expression and epigenetic data analysis -
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- Genomics
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- Systems Biology
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- Software tool
Phylogibbs
Regulatory sites in a collection of DNA sequences -
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- Genomics
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- Population genetics
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- Software tool
V-pipe SARS-CoV-2
V-pipe pipeline for SARS-CoV-2 sequencing data -
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- Metagenomics
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- Software tool
LEMMI
Continuous benchmarking of methods for metagenomics -
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- Transcriptomics
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- Software tool
ASAP
Web-based, cooperative portal for single-cell data analyses -
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- Evolution & Phylogeny
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- Software tool
raxmlGUI
raxmlGUI 2.0 is a graphical user interface to RAxML -
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- Metagenomics
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- Software tool
mVIRs
Prediction tool for inducible, bacteria-infecting viruses -
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences -
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- Genomics
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- Evolution biology
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- Software tool
GenSpectrum
Real-time pathogen genomic sequence analysis -
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- Genomics
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- Database
Pathoplexus
Human viral pathogen genomic data sharing platform -