e.g. BLAST, UniProt, MSH6, Albumin...

Structural Biology

SWISS-MODEL Repository

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Protein structure homology models

ModelArchive

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Repository of predicted macromolecular structure models

SwissDock

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Docking of small ligands into protein active sites

System Biology

MetaNetX

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Metabolic network repository & analysis

Cellosaurus

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Knowledge resource on cell lines

Genes & Genomes

Bgee

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Gene expression expertise

Evolution & Phylogeny

OMA

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Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

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Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

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Protein-protein interaction networks and enrichment analysis

UniProtKB

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Protein sequence database

ViralZone

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Factsheets about viruses linked to sequence databases

ENZYME

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Enzyme nomenclature database

HAMAP

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UniProtKB family classification and annotation

SwissLipids

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Knowledge resource for lipids

VenomZone

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Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins
Search results: database and tool description

17 resources found for Multiple%20sequence%20alignment

      • Proteins & Proteomes
      • Software tool

    pftools
    Build, calibrate, and search biological sequences
      • Glycomics
      • Proteins & Proteomes
      • Software tool

    GlycoSiteAlign
    Multiple alignment of sequences around glycosylation sites
      • Proteins & Proteomes
      • Software tool

    Sulfinator
    Predict tyrosine sulfation sites in protein sequences
      • Proteins & Proteomes
      • Systems Biology
      • Database

    TCS
    Predict interaction specificity in bacterial signalling
      • Transcriptomics
      • Systems Biology
      • Software tool

    ISA
    Finding modules in gene expression data
      • Genomics
      • Systems Biology
      • Software tool

    Phylogibbs
    Regulatory sites in a collection of DNA sequences
      • Transcriptomics
      • Database
      • Software tool

    ASAP
    Web-based, cooperative portal for single-cell data analyses
      • Evolution & Phylogeny
      • Software tool

    raxmlGUI
    raxmlGUI 2.0 is a graphical user interface to RAxML
      • Proteins & Proteomes
      • Text mining & Machine learning
      • Database

    MHC Motif Atlas
    MHC Motif Atlas
      • Evolution biology
      • Systems Biology
      • Text mining & Machine learning
      • Software tool

    CAPTAIN
    Decision-support tool for conservation area prioritization
      • Proteins & Proteomes
      • Software tool

    prolfqua
    R package for protein differential expression analysis
      • Transcriptomics
      • Database
      • Software tool

    Fly Cell Atlas
    Single-cell transcriptomes of the entire adult Drosophila
      • Transcriptomics
      • Database
      • Software tool

    Human Cell Atlas
    Mapping the human body at the cellular level
      • Metagenomics
      • Database

    BeeBiome
    Bee-associated microbes/viruses
      • Transcriptomics
      • Proteins & Proteomes
      • Systems Biology
      • Software tool

    NOODAI
    Multi-omics data analysis and integration