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- Proteins & Proteomes
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- Database
UniProtKB
Protein sequence database
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Fact sheets about viruses linked to sequence databases
Enzyme nomenclature database
UniProtKB family classification and annotation
Relationships between protein sequences and motifs
Knowledge resource for lipids
Portal to venom protein UniProtKB entries
Interactive, annotated similarity network of all proteins
43 resources found for Comparison
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- Transcriptomics
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- Evolution biology
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- Database
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- Software tool
Bgee
Gene expression expertise -
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- Evolution & Phylogeny
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- Database
OrthoDB
Ortholog evolutionary and functional annotations -
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- Evolution & Phylogeny
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- Database
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- Software tool
OMA
Orthology inference among complete genomes -
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- Proteins & Proteomes
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- Lipidomics
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- Database
SwissLipids
Knowledge resource for lipids -
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- Proteins & Proteomes
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- Metabolomics
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- Database
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- Software tool
MetaNetX
Metabolic network repository & analysis -
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- Proteins & Proteomes
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- Database
VenomZone
Portal to venom protein UniProtKB entries -
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- Proteins & Proteomes
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- Structural analysis
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- Software tool
SwissTargetPrediction
Target prediction for bioactive small molecules -
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- Medicinal chemistry
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- Software tool
SwissSimilarity
Ligand-based virtual screening -
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- Genomics
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- Software tool
TagScan
Genome-wide sequence tag scanner -
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- Genomics
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- Systems Biology
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- Database
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- Software tool
Progenetix
Genomic profiles of cancer samples with focus on CNV -
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- Proteins & Proteomes
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- Software tool
pftools
Build, calibrate, and search biological sequences -
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- Proteins & Proteomes
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- Software tool
MSight
Mass Spectrometry Imager -
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- Metagenomics
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- Population genetics
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- Database
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- Software tool
mOTUs
Microbial taxonomic and population genomic profiler -
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- Proteins & Proteomes
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- Software tool
MELANIE
2-D PAGE analysis -
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- Glycomics
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- Software tool
Glynsight
Visualise and compare glycan expression profiles -
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- Proteins & Proteomes
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- Database
UniProtKB/Swiss-Prot
Protein knowledgebase -
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- Proteins & Proteomes
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- Software tool
SIM
Alignment of two protein sequences or within a sequence -
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- Proteins & Proteomes
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- Metabolomics
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- Database
Rhea
Expert-curated database of biochemical reactions -
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- Proteins & Proteomes
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- Software tool
FindPept
Unspecific protein cleavage from experimental masses -
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- Proteins & Proteomes
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- Software tool
FindMod
Potential PTMs and single amino acid substitutions -
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- Proteins & Proteomes
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- Software tool
UniProt ClustalO
Align two or more protein sequences -
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- Proteins & Proteomes
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- Software tool
UniProt BLAST
BLAST sequence similarity search on the UniProt web site -
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- Proteins & Proteomes
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- Structural analysis
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- Database
Click2Drug
Directory of computational drug design tools -
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- Proteins & Proteomes
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- Software tool
Dotlet
Regions of close similarity in 2 sequences -
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- Transcriptomics
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- Software tool
ISA
Finding modules in gene expression data -
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- Transcriptomics
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- Software tool
ExpressionView
Biclusters identified in gene expression data -
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- Genes & Genomes
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- Evolution & Phylogeny
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- Database
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- Software tool
SwissOrthology
One-stop shop for orthologs -
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- Medicinal chemistry
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- Database
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- Software tool
SwissDrugDesign
Widening access to computer-aided drug design -
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- Transcriptomics
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- Evolution & Phylogeny
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- Systems Biology
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- Database
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- Software tool
SwissRegulon Portal
Tools and data for regulatory genomics -
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- Transcriptomics
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- Evolution biology
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- Database
Bgee SPARQL endpoint
SPARQL access to the Bgee gene expression database -
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- Metagenomics
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- Software tool
LEMMI
Continuous benchmarking of methods for metagenomics -
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- Evolution & Phylogeny
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- Software tool
OrthoLoger
Accurate and scalable inference of groups of orthologs -
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- Proteins & Proteomes
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- Metabolomics
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- Database
Rhea SPARQL endpoint
SPARQL access to the Rhea knowledgebase -
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- Glycomics
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- Software tool
GlyConnect Compozitor
Contextualises glycan composition sets -
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- Proteins & Proteomes
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- Glycomics
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- Database
Glyco@Expasy
Zooming in on web-based glycoinformatics resources -
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- Evolution & Phylogeny
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- Software tool
Phylo.io
A tool for visualising and comparing phylogenetic trees -
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- Evolution & Phylogeny
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- Database
Swiss-Trees
A collection of gold standard gene phylogenies -
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- Proteins & Proteomes
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- Metabolomics
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- Database
MetaNetX SPARQL endpoint
SPARQL access to MetaNetX -
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- Genomics
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- Text mining & Machine learning
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- Database
cancercelllines.org
Genomic variants in human cancer cell lines -
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- Genomics
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- Evolution biology
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- Software tool
GenSpectrum
Real-time pathogen genomic sequence analysis -
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- Genomics
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- Database
Pathoplexus
Human viral pathogen genomic data sharing platform -
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- Transcriptomics
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- Systems Biology
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- Software tool
Cellstates
Infering clusters of cells in scRNA-seq data -