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- Proteins & Proteomes
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- Database
UniProtKB
Protein sequence database
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Fact sheets about viruses linked to sequence databases
Enzyme nomenclature database
UniProtKB family classification and annotation
Relationships between protein sequences and motifs
Knowledge resource for lipids
Portal to venom protein UniProtKB entries
Interactive, annotated similarity network of all proteins
18 resources found for Prediction and recognition
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- Evolution & Phylogeny
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- Database
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- Software tool
OMA
Orthology inference among complete genomes -
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- Genomics
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- Database
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- Software tool
SNP2TFBS
Regulatory SNPs affecting TF binding site affinity -
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- Genomics
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- Software tool
IScan
Insertion sequence identification in whole genomes -
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- Genomics
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- Systems Biology
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- Database
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- Software tool
iPtgxDBs
Platform for integrated proteogenomics databases -
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- Systems Biology
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- Software tool
Genome History
Gene duplicate identification -
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- Proteins & Proteomes
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- Database
UniProtKB/Swiss-Prot
Protein knowledgebase -
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- Proteins & Proteomes
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- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families -
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- Transcriptomics
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- Systems Biology
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- Software tool
CRUNCH
Automated pipeline for ChIP-seq data analysis -
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- Proteins & Proteomes
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- Software tool
ScanProsite
Protein sequences against PROSITE -
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- Transcriptomics
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- Evolution & Phylogeny
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- Systems Biology
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- Database
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- Software tool
SwissRegulon Portal
Tools and data for regulatory genomics -
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- Evolution & Phylogeny
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- Software tool
OrthoLoger
Accurate and scalable inference of groups of orthologs -
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- Proteins & Proteomes
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- Metabolomics
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- Software tool
rawrr
R package for fast reading Thermo Fisher Scientific MS data -
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- Metagenomics
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- Software tool
mVIRs
Prediction tool for inducible, bacteria-infecting viruses -
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- Systems Biology
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- Software tool
OMAMO
OMAMO allows the user to find the best simple model organism -
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- Genomics
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- Text mining & Machine learning
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- Database
cancercelllines.org
Genomic variants in human cancer cell lines -
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- Genes & Genomes
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- Systems Biology
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- Software tool
CREMA
Cis-Regulatory Element Motif Activities -
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- Proteins & Proteomes
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- Systems Biology
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- Database
Protein Universe Atlas
Interactive, annotated similarity network of all proteins -