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- Evolution biology
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- Genomics
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- Database
Selectome
Database of positive selection
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Fact sheets about viruses linked to sequence databases
Enzyme nomenclature database
UniProtKB family classification and annotation
Relationships between protein sequences and motifs
Knowledge resource for lipids
Portal to venom protein UniProtKB entries
Interactive, annotated similarity network of all proteins
Search results: database and tool description
16 resources found for Phylogeny
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- Evolution & Phylogeny
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- Database
OrthoDB
Ortholog evolutionary and functional annotations -
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- Evolution & Phylogeny
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- Database
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- Software tool
OMA
Orthology inference among complete genomes -
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- Genes & Genomes
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- Evolution & Phylogeny
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- Software tool
REALPHY
Inference of phylogenetic trees from genome data -
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- Evolution biology
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- Genomics
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- Software tool
Nextstrain
Impact of pathogen genome data on science and public health -
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- Transcriptomics
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- Evolution biology
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- Software tool
BUSCO
From QC to gene prediction and phylogenomics -
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- Genes & Genomes
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- Evolution & Phylogeny
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- Database
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- Software tool
SwissOrthology
One-stop shop for orthologs -
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- Transcriptomics
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- Evolution & Phylogeny
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- Systems Biology
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- Database
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- Software tool
SwissRegulon Portal
Tools and data for regulatory genomics -
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- Evolution & Phylogeny
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- Database
OMA SPARQL endpoint
SPARQL access to the OMA Orthology database -
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- Evolution & Phylogeny
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- Database
OrthoDB SPARQL endpoint
SPARQL access to the OrthoDB catalog of orthologs -
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- Evolution & Phylogeny
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- Software tool
OrthoLoger
Accurate and scalable inference of groups of orthologs -
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- Evolution & Phylogeny
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- Software tool
raxmlGUI
raxmlGUI 2.0 is a graphical user interface to RAxML -
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- Evolution & Phylogeny
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- Software tool
Phylo.io
A tool for visualising and comparing phylogenetic trees -
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- Evolution & Phylogeny
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- Database
Swiss-Trees
A collection of gold standard gene phylogenies -
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences -
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- Evolution biology
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- Genes & Genomes
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- Software tool
BEAST2
Bayesian evolutionary analysis by sampling trees -