e.g. BLAST, UniProt, MSH6, Albumin...

Structural Biology

SWISS-MODEL Repository

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Protein structure homology models

ModelArchive

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Repository of predicted macromolecular structure models

SwissDock

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Docking of small ligands into protein active sites

System Biology

MetaNetX

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Metabolic network repository & analysis

Cellosaurus

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Knowledge resource on cell lines

Genes & Genomes

Bgee

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Gene expression expertise

Evolution & Phylogeny

OMA

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Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

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Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

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Protein-protein interaction networks and enrichment analysis

UniProtKB

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Protein sequence database

ViralZone

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Factsheets about viruses linked to sequence databases

ENZYME

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Enzyme nomenclature database

HAMAP

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UniProtKB family classification and annotation

SwissLipids

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Knowledge resource for lipids

VenomZone

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Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins
Search results: database and tool description

12 resources found for Network analysis

      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    STRING
    Protein-protein interaction networks and enrichment analysis
      • Proteins & Proteomes
      • Metabolomics
      • Database
      • Software tool

    MetaNetX
    Metabolic network repository & analysis
      • Glycomics
      • Software tool

    Glydin'
    Network representation of known glycan determinants
      • Systems Biology
      • Genomics
      • Software tool

    CRUNCH
    Automated pipeline for ChIP-seq data analysis
      • Transcriptomics
      • Systems Biology
      • Software tool

    ISMARA
    Webservice for gene expression and epigenetic data analysis
      • Transcriptomics
      • Evolution & Phylogeny
      • Systems Biology
      • Database
      • Software tool

    SwissRegulon Portal
    Tools and data for regulatory genomics
      • Glycomics
      • Software tool

    HMO-Glycologue
    Simulator of Human Milk Oligosaccharide synthesis
      • Genes & Genomes
      • Systems Biology
      • Software tool

    CREMA
    Cis-Regulatory Element Motif Activities
      • Proteins & Proteomes
      • Systems Biology
      • Database

    Protein Universe Atlas
    Interactive, annotated similarity network of all proteins
      • Glycomics
      • Proteins & Proteomes
      • Database

    MatrixDB
    Extracellular proteins and polysaccharides interactions
      • Transcriptomics
      • Proteins & Proteomes
      • Systems Biology
      • Software tool

    NOODAI
    Multi-omics data analysis and integration