Structural Biology

SWISS-MODEL Repository

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Protein structure homology models

ModelArchive

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Repository of predicted macromolecular structure models

SwissDock

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Docking of small ligands into protein active sites

System Biology

MetaNetX

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Metabolic network repository & analysis

Cellosaurus

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Knowledge resource on cell lines

Genes & Genomes

Bgee

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Gene expression expertise

Evolution & Phylogeny

OMA

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Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

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Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

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Protein-protein interaction networks and enrichment analysis

UniProtKB

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Protein sequence database

ViralZone

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Factsheets about viruses linked to sequence databases

ENZYME

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Enzyme nomenclature database

HAMAP

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UniProtKB family classification and annotation

SwissLipids

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Knowledge resource for lipids

VenomZone

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Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins
Search results: database and tool description

16 resources found for DNA sequence

      • Population genetics
      • Software tool

    Arlequin

    An integrated software for population genetics data analysis
      • Genomics
      • Database
      • Software tool

    EPD

    Eukaryotic Promoter Database
      • Genomics
      • Software tool

    SSA

    Analysis of nucleic acid sequence motifs
      • Transcriptomics
      • Software tool

    SIBsim4

    Align expressed RNA sequences on a DNA template
      • Structural analysis
      • Software tool

    OpenStructure

    Molecular modelling and visualisation environment
      • Genomics
      • Software tool

    IScan

    Insertion sequence identification in whole genomes
      • Evolution biology
      • Genes & Genomes
      • Software tool

    GenomeHistory

    Gene duplicate identification
      • Population genetics
      • Genomics
      • Software tool

    fastsimcoal

    Fast sequential Markov coalescent simulation of genomic data
      • Genomics
      • Database
      • Software tool

    ChIP-Seq

    ChIP-Seq data analysis tools
      • Proteins & Proteomes
      • Software tool

    Dotlet

    Regions of close similarity in 2 sequences
      • Genomics
      • Systems Biology
      • Software tool

    Phylogibbs

    Regulatory sites in a collection of DNA sequences
      • Genes & Genomes
      • Software tool

    mVIRs

    Prediction tool for inducible, bacteria-infecting viruses
      • Genomics
      • Database

    Pathoplexus

    Human viral pathogen genomic data sharing platform
      • Genes & Genomes
      • Database
      • Software tool

    Microbe Atlas

    Explore the microbiome of the world
      • Genes & Genomes
      • Proteins & Proteomes
      • Software tool

    MetaGraph

    Petabase-scale sequence search