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- Genomics
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- Population genetics
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- Software tool
V-pipe
Viral genomics pipeline
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Factsheets about viruses linked to sequence databases
Enzyme nomenclature database
Search results: database and tool description
22 resources found for CSV
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- Genomics
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- Software tool
ShoRAH
Analysis of NGS data -
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- Metagenomics
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- Population genetics
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- Database
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- Software tool
mOTUs
Microbial taxonomic and population genomic profiler -
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- Transcriptomics
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- Software tool
miRmap
Prediction of microRNA target repression strength -
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- Glycomics
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- Software tool
Glynsight
Visualise and compare glycan expression profiles -
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- Systems Biology
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- Software tool
CLASTR
Cellosaurus STR similarity search tool -
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- Genomics
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- Population genetics
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- Software tool
V-pipe SARS-CoV-2
V-pipe pipeline for SARS-CoV-2 sequencing data -
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- Genomics
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- Database
TASmania
Toxin-antitoxin database -
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- Genomics
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- Software tool
TASer
Search tool associated to TASmania -
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- Transcriptomics
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- Database
PolyAsite
Database of curated RNA polyadenylation sites -
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- Glycomics
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- Software tool
HMO-Glycologue
Simulator of Human Milk Oligosaccharide synthesis -
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- Text mining & Machine learning
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- Software tool
Variomes
Search engine to support the curation of genomic variants -
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- Systems Biology
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- Software tool
OMAMO
OMAMO allows the user to find the best simple model organism -
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences -
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- Proteins & Proteomes
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- Lipidomics
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- Database
SwissLipids SPARQL endpoint
SPARQL access to the SwissLipids knowledgebase -
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- Proteins & Proteomes
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- Metabolomics
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- Database
MetaNetX SPARQL endpoint
SPARQL access to MetaNetX -
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- Text mining & Machine learning
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- Software tool
Biodiversity PMC
Search a large collection of scientific publications -
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- Transcriptomics
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- Systems Biology
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- Software tool
Cellstates
Infering clusters of cells in scRNA-seq data -
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- Transcriptomics
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- Systems Biology
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- Software tool
Sanity
Single-cell RNA-Seq normalization method -
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- Proteins & Proteomes
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- Glycomics
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- Database
MatrixDB
Extracellular proteins and polysaccharides interactions -
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- Proteins & Proteomes
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- Text mining & Machine learning
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- Database
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- Software tool
MixTCRpred
Predictor of TCR-epitope interactions -
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- Metagenomics
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- Software tool
MAGFlow/BIgMAG
Metagenome metrics and taxonomical annotation visualization -