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- Population genetics
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- Genomics
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- Software tool
V-pipe
Viral genomics pipeline
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Fact sheets about viruses linked to sequence databases
Enzyme nomenclature database
UniProtKB family classification and annotation
Relationships between protein sequences and motifs
Knowledge resource for lipids
Portal to venom protein UniProtKB entries
Interactive, annotated similarity network of all proteins
12 resources found for CSV
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- Genomics
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- Software tool
ShoRAH
Analysis of NGS data -
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- Population genetics
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- Metagenomics
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- Database
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- Software tool
mOTUs
Microbial taxonomic and population genomic profiler -
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- Transcriptomics
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- Software tool
miRmap
Prediction of microRNA target repression strength -
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- Systems Biology
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- Software tool
CLASTR
Cellosaurus STR similarity search tool -
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- Population genetics
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- Genomics
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- Software tool
V-pipe SARS-CoV-2
V-pipe pipeline for SARS-CoV-2 sequencing data -
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- Systems Biology
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- Software tool
OMAMO
OMAMO allows the user to find the best simple model organism -
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences -
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- Proteins & Proteomes
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- Lipidomics
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- Database
SwissLipids SPARQL endpoint
SPARQL access to the SwissLipids knowledgebase -
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- Transcriptomics
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- Systems Biology
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- Software tool
Cellstates
Infering clusters of cells in scRNA-seq data -
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- Transcriptomics
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- Systems Biology
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- Software tool
Sanity
Single-cell RNA-Seq normalization method -
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- Glycomics
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- Proteins & Proteomes
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- Database
MatrixDB
Extracellular proteins and polysaccharides interactions -