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Nanoviridae (taxid:251095)

VIRION

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Non-enveloped, round, , about 18-19 nm in diameter.
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GENOME

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Multipartite (+) composed of 6 to 8 circular segments about 1kb in size. Each ssDNA segment have a common stem-loop region and are encapsidated in a separate particle .
In addition to genomic DNA, satellite-like DNA are commonly found, usually encoding for Rep proteins. These satellite-Rep proteins are only able to initiate replication of their genomic DNA, unlike genomic Rep which promotes replication of all 6-8 viral genomic ssDNAs.

GENE EXPRESSION

Each ssDNA genome segment is monocistronic. In rare cases a gene encodes for two overlapping ORFs.

ENZYMES

REPLICATION

NUCLEAR

  1. Virus penetrates into the host cell.
  2. Uncoating, the viral ssDNA genome .
  3. The ssDNA is converted into dsDNA with the participation of cellular factors.
  4. Bidirectional from the IR promoter produces viral mRNAs and translation of viral proteins.
  5. Replication is initiated by cleavage of the (+)strand by REP, and occurs by producing ssDNA genomes.
  6. These newly synthesized ssDNA can either
    a) be converted to dsDNA and serve as a template for transcription/replication
    b) be encapsidated by CP and form virions that will be released in the extracellular space. c) be transported outside the nucleus, to a neighboring cell through plasmodesmata (cell-cell movement) with the help of .

Host-virus interaction

Cell-cycle modulation

Nanoviruses Clink protein is probably involved in binding and inhibiting host retinoblastoma protein. Inhibition of retinoblastoma protein induces for optimal replication conditions.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

39 entries grouped by strain

Faba bean necrotic yellows virus (isolate Egyptian EV1-93) (FBNYV) reference strain

8 entries

Select_allDeselect_all
MREP_FBNY1 Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.-) (ATP-dependent helicase ...
CLINK_FBNY1 Cell cycle link protein (Clink)
U4_FBNY1 Protein U4
MVP_FBNY1 Putative movement protein (MP)
CAPSD_FBNY1 Capsid protein (CP) (Coat protein)
NSP_FBNY1 Putative nuclear shuttle protein
U1_FBNY1 Protein U1
U2_FBNY1 Protein U2

Faba bean necrotic yellows virus (isolate Syrian SV292-88) (FBNYV) reference strain

8 entries

Select_allDeselect_all
MREP_FBNY2 Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.-) (ATP-dependent helicase ...
MVP_FBNY2 Putative movement protein (MP)
CAPSD_FBNY2 Capsid protein (CP) (Coat protein)
NSP_FBNY2 Putative nuclear shuttle protein
CLINK_FBNY2 Cell cycle link protein (Clink)
U4_FBNY2 Protein U4
U1_FBNY2 Protein U1
U2_FBNY2 Protein U2

Milk vetch dwarf virus (isolate N) (MDV) reference strain

8 entries

Select_allDeselect_all
MREP_MDV1 Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.-)
U4_MDV1 Protein U4
MVP_MDV1 Putative movement protein (MP)
NSP_MDV1 Putative nuclear shuttle protein
CLINK_MDV1 Cell cycle link protein (Clink)
CAPSD_MDV1 Capsid protein (CP) (Coat protein)
U2_MDV1 Protein U2
U1_MDV1 Protein U1

Banana bunchy top virus (isolate Autralia) (BBTV) reference strain

7 entries

Select_allDeselect_all
MREP_BBTVA Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.-)
CAPSD_BBTVA Capsid protein (CP) (Coat protein)
MVP_BBTVA Movement and RNA silencing protein (MP)
NSP_BBTVA Putative nuclear shuttle protein
CLINK_BBTVA Cell cycle link protein (Clink)
U5_BBTVA Uncharacterized 5 kDa protein in M-Rep ORF (Uncharacterized protein U5)
U3_BBTVA Uncharacterized protein U3

Subterranean clover stunt virus (strain F) (SCSV) reference strain

6 entries

Select_allDeselect_all
MREP_SCSVF Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.-)
MVP_SCSVF Putative movement protein (MP)
CLINK_SCSVF Cell cycle link protein (Clink)
NSP_SCSVF Putative nuclear shuttle protein
CAPSD_SCSVF Capsid protein (CP) (Coat protein)
U1_SCSVF Protein U1

Milk vetch dwarf virus (isolate 9) (MDV)

1 entry

CAPSD_MDV9 Capsid protein (CP) (Coat protein)

Subterranean clover stunt virus (strain J) (SCSV)

1 entry

CAPSD_SCSVJ Capsid protein (CP) (Coat protein)
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Babuvirus abacae taxid:438782

Black medic leaf roll virus taxid:2038729

Faba bean necrotic stunt virus taxid:283824

Faba bean necrotic yellows virus taxid:59817

Faba bean necrotic yellows virus (isolate Egyptian EV1-93) taxid:291603

Milk vetch dwarf virus taxid:67585

Protein ModelArchive

Milk vetch dwarf virus (isolate N) taxid:291605

Pea necrotic yellow dwarf virus taxid:753670

Pea yellow stunt virus taxid:1436892