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HAMAP: Yersinia pseudotuberculosis complete proteome

General information

Species:  Yersinia pseudotuberculosis
Species code: YERPS
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia (TaxID: 633) [NEWT/ NCBI]
Description: Yersinia pseudotuberculosis is a soil- and water-borne enteropathogen. Numerous species are potential carriers of Y.pseudotuberculosis. The asymptomatic carriage can evolve into a fatal infection when the animals are stressed. In Human, different degrees of illness are observed, from fever and abdominal pain to septicemia.
Properties: Presence of flagella: Yes
Interaction: Animal pathogen in Mammalia
Number of membranes: 2
Number of inteins:0
Statistics: Number of YERPS entries in the UniProt Knowledgebase: 4016 (851 in UniProtKB/Swiss-Prot + 3165 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    IP32953 / Serotype I
Genome structure:
• Chromosome EMBL accession number BX936398 (circular; 4,744,671 bp) (download entry) (download Genome Reviews).
• Plasmid pYV EMBL accession number BX936399 (circular; 68,525 bp) (download entry) (download Genome Reviews).
• Plasmid pYptb32953 EMBL accession number BX936400 (circular; 27,702 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15358858; [ NCBI , EBI , Israel , Japan ]
Chain P.S.G., Carniel E., Larimer F.W., Lamerdin J., Stoutland P.O., Regala W.M., Georgescu A.M., Vergez L.M., Land M.L., Motin V.L., Brubaker R.R., Fowler J., Hinnebusch J., Marceau M., Medigue C., Simonet M., Chenal-Francisque V., Souza B., Dacheux D., Elliott J.M., Derbise A., Hauser L.J., Garcia E. ;
"Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis.";
Proc. Natl. Acad. Sci. U.S.A. 101:13826-13831(2004).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Yersinia&GLspecies=pseudotuberculosis&GLstrain=IP32953
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid273123%5Borgn%5D
ERIC: http://www.ericbrc.org/portal/eric/yersiniapseudotuberculosisip32953
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ypse_IP32953
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Yersinia_pseudotuberculosis.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p12950_Yer_pseud
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntyp05
 EBI Proteome Analysis page



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