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HAMAP: Xanthomonas oryzae pv. oryzae complete proteome

General information

Species:  Xanthomonas oryzae pv. oryzae
Species code: XANOR
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas (TaxID: 64187) [NEWT/ NCBI]
Description: Xanthomonas oryzae is a Gram-negative bacterium and is the causative agent of bacterial blight on rice. Bacterial blight is a major disease in tropical Asian countries where high-yielding rice cultivars are often highly susceptible to it. It is a vascular disease resulting in tannish-gray to white lesions along the leaf veins. In severely infested fields, bacterial blight can cause yield losses up to 50%.
Properties: Presence of flagella: Yes
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of XANOR entries in the UniProt Knowledgebase: 4380 (398 in UniProtKB/Swiss-Prot + 3982 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    KACC10331 / KXO85
Genome structure:
Chromosome EMBL accession number AE013598 (circular; 4,941,439 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15673718; [ NCBI , EBI , Israel , Japan ]
Lee B.-M., Park Y.-J., Park D.-S., Kang H.-W., Kim J.-G., Song E.-S., Park I.-C., Yoon U.-H., Hahn J.-H., Koo B.-S., Lee G.-B., Kim H., Park H.-S., Yoon K.-O., Kim J.-H., Jung C.-H., Koh N.-H., Seo J.-S., Go S.-J. ;
"The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice.";
Nucleic Acids Res. 33:577-586(2005).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Xanthomonas&GLspecies=oryzae&GLstrain=KACC10331
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid291331%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Xory_KACC10331
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Xanthomonas_oryzae.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p12931_Xan_oryza
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntxo01
 EBI Proteome Analysis page



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