ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

HAMAP: Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) complete proteome

General information

Species:  Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
Species code: VIBC3
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio (TaxID: 345073) [NEWT/ NCBI]
Description: Vibrio species represent a significant portion of the culturable heterotrophic bacteria of oceans, coastal waters and estuaries. Various species of this genus are devastating pathogens for finfish, shellfish and mammals.
A Gram-negative, rod-shaped bacterium, V.cholerae is the etiological agent of cholera, a severe diarrheal disease that occurs most frequently in epidemic form. Cholera has been epidemic in southern Asia for at least 1000 years; epidemics are usually associated with poor sanitary conditions. Vibrio cholerae as a species includes both pathogenic and non pathogenic strains that vary in their virulence and gene content. There are 2 major serogroups that cause epidemic cholera, O1 and O139. Serogroup O1 is further classified into two biotypes, classical and El Tor, and into two major serotypes, Inaba and Ogawa. Strain O395 is a classical serotype O1 serotype strain of the Ogawa biotype. O1 strains may exhibit serotype conversion or switching between Inaba and Ogawa serotypes. O395 has been extensively used for molecular analysis of virulence factors.
Properties: Presence of flagella: Yes
Interaction: Animal pathogen in Mammalia
Number of membranes: 2
Number of inteins:0
Statistics: Number of VIBC3 entries in the UniProt Knowledgebase: 3772 (507 in UniProtKB/Swiss-Prot + 3265 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 39541 / Ogawa 395 / O395
Genome structure:
• Chromosome 1 EMBL accession number CP000626 (circular; 1,108,250 bp) (download entry) (download Genome Reviews).
• Chromosome 2 EMBL accession number CP000627 (circular; 3,024,069 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] Heidelberg J. ;
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
Web links:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=15667
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Vcho_O395
NMPDR: http://www.nmpdr.org/FIG/seedviewer.cgi?pattern=345073.6;page=SearchResult
 EBI Proteome Analysis page



Tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
 Hosted by ch flag SIB Switzerland Mirror sites: Australia  Brazil  Canada  China  Korea
Search for