ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

HAMAP: Roseiflexus sp. (strain RS-1) complete proteome

General information

Species:  Roseiflexus sp. (strain RS-1)
Species code: ROSS1
Taxonomy: Bacteria; Chloroflexi; Chloroflexales; Chloroflexaceae; Roseiflexus (TaxID: 357808) [NEWT/ NCBI]
Description: Roseiflexus is a filamentous anoxygenic phototroph, one of the green filamentous bacteria. This lineage is placed on the deepest branch of all photosynthetic bacteria. RS-1 was isolated from a microbial mat in Octopus Spring, in Yellowstone National Park, U.S.A. It does not have chlorosomes, which are a type of light-harvesting structure. Comparative genomics indicates that it appears to have the genetic capacity for CO2 reduction via the 3-hydroxypropionate pathway (adapted in part from PubMed 17635550).
Properties: Presence of flagella: not known
Interaction: No
Number of membranes: not known
Number of inteins:0
Statistics: Number of ROSS1 entries in the UniProt Knowledgebase: 4494 (177 in UniProtKB/Swiss-Prot + 4317 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    RS-1
Genome structure
Chromosome EMBL accession number CP000686 (circular; 5,801,598 bp) (download entry) (download Genome Reviews).
References
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Bryant D.A., Richardson P. ;
"Complete sequence of Roseiflexus sp. RS-1.";
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
Web links
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/ros_r/ros_r.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=16190
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Rose_RS1
 EBI Proteome Analysis page



Tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
 Hosted by ch flag SIB Switzerland Mirror sites: Australia  Brazil  Canada  China  Korea
Search for