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HAMAP: Pseudomonas fluorescens (strain Pf0-1) complete proteome

General information

Species:  Pseudomonas fluorescens (strain Pf0-1)
Species code: PSEPF
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas (TaxID: 205922) [NEWT/ NCBI]
Description: Pseudomonas fluorescens is a nonpathogenic saprophyte that colonizes soil, water and plant surface environments. It produces a soluble, greenish fluorescent pigment, particularly under conditions of low iron availability. It is a obligate aerobe, except for some strains that can utilize NO3 as an electron acceptor in place of O2. It is motile by means of multiple polar flagella. It has simple nutritional requirements and grows well in mineral salts media supplemented with any of a large number of carbon sources. Pseudomonas fluorescens (strain Pf0-1) was isolated from agricultural soil. Pseudomonas fluorescens strains are being studied for use in applications that require release and survival of bacteria in the soil such as bioremediation of various organic compounds, and biocontrol of pathogens in agriculture. A number of strains suppress plant diseases by protecting the seeds and roots from fungal infection. Competitive exclusion of pathogens as the result of rapid colonization of the rhizosphere by Pseudomonas fluorescens may also be an important factor in disease control.
Properties: Presence of flagella: Yes
Interaction: Plant saprophyte
Number of membranes: 2
Number of inteins:0
Statistics: Number of PSEPF entries in the UniProt Knowledgebase: 5728 (533 in UniProtKB/Swiss-Prot + 5195 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    Pf0-1
Genome structure:
Chromosome EMBL accession number CP000094 (circular; 6,438,405 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyripides N., Anderson I., Richardson P. ;
"Complete sequence of Pseudomonas fluorescens PfO-1.";
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/psefl/psefl.home.html
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Pseudomonas&GLspecies=fluorescens&GLstrain=PfO-1
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid205922%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Pflu_PFO1
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p12_Pse_fluor
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntpf02
 EBI Proteome Analysis page



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