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HAMAP: Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni complete proteome

General information

Species:  Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni
Species code: LEPIC
Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Leptospiraceae; Leptospira (TaxID: 44275) [NEWT/ NCBI]
Description: Leptospira interrogans causes leptospirosis whose manifestations are fever, headache, malaise, myalgia, occasionally meningitidis, sometimes jaundice, renal insufficiency, anemia and hemorrhage of the skin. Rarely lethal. Worldwide spread except in polar regions. Contamination occurs through contact of the skin or mucous membranes with contaminated water, soil or vegetation or through direct contact with urine or tissues of infected animals. Farm and pet animals, including cattle, dogs, horses and swine, rats and other rodents act as the normal carrier host; wild animals, including deer, squirrels, foxes, skunks and even reptiles and amphibians may be infected.
Properties: Presence of flagella: Yes
Interaction: Animal pathogen in Mammalia
Number of membranes: 2
Number of inteins: 2 in 2 different sequences
Statistics: Number of LEPIC entries in the UniProt Knowledgebase: 3654 (366 in UniProtKB/Swiss-Prot + 3288 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    Fiocruz L1-130
Genome structure:
• Chromosome I EMBL accession number AE016823 (circular; 4,277,185 bp) (download entry) (download Genome Reviews).
• Chromosome II EMBL accession number AE016824 (circular; 350,181 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15028702; [ NCBI , EBI , Israel , Japan ]
Nascimento A.L.T.O., Ko A.I., Martins E.A.L., Monteiro-Vitorello C.B., Ho P.L., Haake D.A., Verjovski-Almeida S., Hartskeerl R.A., Marques M.V., Oliveira M.C., Menck C.F.M., Leite L.C.C., Carrer H., Coutinho L.L., Degrave W.M., Dellagostin O.A., El-Dorry H., Ferro E.S., Ferro M.I.T., Furlan L.R., Gamberini M., Giglioti E.A., Goes-Neto A., Goldman G.H., Goldman M.H.S., Harakava R., Jeronimo S.M.B., Junqueira-de-Azevedo I.L.M., Kimura E.T., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Marino C.L., Nunes L.R., de Oliveira R.C., Pereira G.G., Reis M.S., Schriefer A., Siqueira W.J., Sommer P., Tsai S.M., Simpson A.J.G., Ferro J.A., Camargo L.E.A., Kitajima J.P., Setubal J.C., Van Sluys M.A. ;
"Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis.";
J. Bacteriol. 186:2164-2172(2004).
Web links:
Official genome site(s):
http://aeg.lbi.ic.unicamp.br/world/lic/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Leptospira&GLspecies=interrogans&GLstrain=FiocruzL1130
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid267671%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Lint_COPENHAGENI_FIOCRUZL1130
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Leptospira_interrogans.html
LeptoList: http://bioinfo.hku.hk/GenoList/index.pl?database=leptolist
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p10687_Lep_inter
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntli03
 EBI Proteome Analysis page



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