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HAMAP: Gloeobacter violaceus complete proteome

General information

Species:  Gloeobacter violaceus
Species code: GLOVI
Taxonomy: Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter (TaxID: 33072) [NEWT/ NCBI]
Description: Gloeobacter violaceus PCC 7421 is a rod-shaped cyanobacterium isolated from calcareous rock in Switzerland. It is an obligate photoautotroph, sensitive to strong light and it has a relatively long generation time.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins: 2 in 2 different sequences
Statistics: Number of GLOVI entries in the UniProt Knowledgebase: 4406 (428 in UniProtKB/Swiss-Prot + 3978 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    PCC 7421
Genome structure:
Chromosome EMBL accession number BA000045 (circular; 4,659,019 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22977040; PubMed=14621292; [ NCBI , EBI , Israel , Japan ]
Nakamura Y., Kaneko T., Sato S., Mimuro M., Miyashita H., Tsuchiya T., Sasamoto S., Watanabe A., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Takeuchi C., Yamada M., Tabata S. ;
"Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids.";
DNA Res. 10:137-145(2003).
Web links:
Official genome site(s):
http://bacteria.kazusa.or.jp/cyanobase/Gloeobacter/index.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid251221%5Borgn%5D
Genome Atlas: http://www.cbs.dtu.dk/services/gwBrowser/project.php?pid=9606
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Gvio_PCC7421
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Gloeobacter_violaceus.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p9606_Glo_viola
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntgv01
 EBI Proteome Analysis page



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