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HAMAP: Escherichia coli O139:H28 (strain E24377A / ETEC) complete proteome

General information

Species:  Escherichia coli O139:H28 (strain E24377A / ETEC)
Species code: ECO24
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia (TaxID: 331111) [NEWT/ NCBI]
Description: Escherichia coli is a Gram-negative straight rod, which either uses peritrichous flagella for mobility or is nonmotile. It is a facultatively anaerobic chemoorganotroph capable of both respiratory and fermentative metabolism. E.coli serves a useful function in the body by suppressing the growth of harmful bacterial species and by synthesising appreciable amounts of vitamins. It is an important component of the biosphere. It colonizes the lower gut of animals and survives when released to the natural environment, allowing widespread dissemination to new hosts. Pathogenic E.coli strains are responsible for infection of the enteric, urinary, pulmonary and nervous systems.
Escherichia coli E24377A is an enterotoxigenic E. coli (ETEC) isolate, ETEC being the leading cause of traveler's diarrhea, characterized by a large volume of watery diarrhea. ETEC primarily colonizes the small intestine by way of the colonization factor antigen (CFA) pili; E. coli E24377A has been shown to contain CFA pili types CS1 and CS3. Two additional toxins are thought to be responsible for the virulence, a heat stable and a heat labile enterotoxin. Other virulence factors include serotype O139:H28 and potential factors encoded on 6 uncharacterized plasmids.
Properties: Presence of flagella: Yes?
Interaction: Animal pathogen in Mammalia
Number of membranes: 2
Number of inteins:0
Statistics: Number of ECO24 entries in the UniProt Knowledgebase: 4915 (743 in UniProtKB/Swiss-Prot + 4172 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    E24377A / ETEC
Genome structure
• Chromosome EMBL accession number CP000800 (circular; 4,979,619 bp) (download entry) (download Genome Reviews).
• Plasmid pETEC_5 EMBL accession number CP000801 (circular; 5,033 bp) (download entry) (download Genome Reviews).
• Plasmid pETEC_6 EMBL accession number CP000798 (circular; 6,199 bp) (download entry) (download Genome Reviews).
• Plasmid pETEC_35 EMBL accession number CP000796 (circular; 34,367 bp) (download entry) (download Genome Reviews).
• Plasmid pETEC_73 EMBL accession number CP000797 (circular; 70,609 bp) (download entry) (download Genome Reviews).
• Plasmid pETEC_74 EMBL accession number CP000799 (circular; 74,224 bp) (download entry) (download Genome Reviews).
• Plasmid pETEC_80 EMBL accession number CP000795 (circular; 79,237 bp) (download entry) (download Genome Reviews).
References
[1] Rasko D.A., Rosovitz M.J., Brinkley C., Myers G.S.A., Seshadri R., Cer R.Z., Jiang L., Ravel J. ;
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
Web links
Official genome site(s):
http://msc.tigr.org/e_coli_and_shigella/escherichia_coli_e24377a/index.shtml
Other web sites:
coliBASE: http://xbase.bham.ac.uk/colibase/genome.pl?id=1547
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=13960
ERIC: http://www.ericbrc.org/portal/eric/ecolietece24377a
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ecol_E24377A
 EBI Proteome Analysis page



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