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HAMAP: Chlorobium tepidum complete proteome

General information

Species:  Chlorobium tepidum
Species code: CHLTE
Taxonomy: Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum (TaxID: 1097) [NEWT/ NCBI]
Description: Chlorobium tepidum is a Gram-negative bacterium of the green-sulfur phylum originally isolated from high-sulfide hot springs in New Zealand. It is thermophile and grows optimally at 48 Celsius degrees. It use multiple types of bacteriochlorophylls and carotenoids in unique structures known as chlorosomes for light harvesting.
Properties: Presence of flagella: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of CHLTE entries in the UniProt Knowledgebase: 2250 (389 in UniProtKB/Swiss-Prot + 1861 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 49652 / DSM 12025 / TLS
Genome structure
Chromosome EMBL accession number AE006470 (circular; 2,154,946 bp) (download entry) (download Genome Reviews).
References
[1] MEDLINE=22103685; PubMed=12093901; [ NCBI , EBI , Israel , Japan ]
Eisen J.A., Nelson K.E., Paulsen I.T., Heidelberg J.F., Wu M., Dodson R.J., DeBoy R.T., Gwinn M.L., Nelson W.C., Haft D.H., Hickey E.K., Peterson J.D., Durkin A.S., Kolonay J.F., Yang F., Holt I.E., Umayam L.A., Mason T.M., Brenner M., Shea T.P., Parksey D.S., Nierman W.C., Feldblyum T.V., Hansen C.L., Craven M.B., Radune D., Vamathevan J.J., Khouri H.M., White O., Gruber T.M., Ketchum K.A., Venter J.C., Tettelin H., Bryant D.A., Fraser C.M. ;
"The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.";
Proc. Natl. Acad. Sci. U.S.A. 99:9509-9514(2002).
Web links
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlorobium&GLspecies=tepidum&GLstrain=TLS
CyanoBase: http://bacteria.kazusa.or.jp/cyanobase/Chlorobium/index.html
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid194439%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ctep_TLS
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Chlorobium_tepidum.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p302_Chl_tepid
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=gct
 EBI Proteome Analysis page



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