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HAMAP: Chlamydophila abortus complete proteome

General information

Species:  Chlamydophila abortus
Species code: CHLAB
Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila (TaxID: 83555) [NEWT/ NCBI]
Description: Gram-negative, obligate intracellular pathogen that is an important cause of late gestation abortions in ruminants and pigs. It can also cause acute zoonotic infections in humans: pregnant women who are exposed to infected animals are at risk of abortion and life-threatening illness. The strain sequenced, S26/3, is a low-passage strain that was isolated in Scotland in 1979 from a vaccinated ewe that aborted.
Properties: Presence of flagella: No
Interaction: Animal pathogen in Mammalia (intracellular obligate)
Number of membranes: 2
Number of inteins:0
Statistics: Number of CHLAB entries in the UniProt Knowledgebase: 932 (228 in UniProtKB/Swiss-Prot + 704 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    S26/3
Genome structure:
Chromosome EMBL accession number CR848038 (circular; 1,144,377 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15837807; [ NCBI , EBI , Israel , Japan ]
Thomson N.R., Yeats C., Bell K., Holden M.T.G., Bentley S.D., Livingstone M., Cerdeno-Tarraga A.-M., Harris B., Doggett J., Ormond D., Mungall K., Clarke K., Feltwell T., Hance Z., Sanders M., Quail M.A., Price C., Barrell B.G., Parkhill J., Longbottom D. ;
"The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation.";
Genome Res. 15:629-640(2005).
Web links:
Official genome site(s):
http://www.sanger.ac.uk/Projects/C_abortus/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlamydophila&GLspecies=abortus&GLstrain=S26-3
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid218497%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Cabo_S263
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Chlamydophila_abortus.html
NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=218497.4;page=SearchResult
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p355_Chl_abort
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntca04
 EBI Proteome Analysis page



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