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UniProtKB rule member sequences

UniProtKB sets

The count of rule members is indicated for each major kingdom (i.e. Archaea, Bacteria, Eukaryota, Viruses). By clicking on each count you can access a detailed list of:

Taxonomic distribution

For Protein rules

This section displays the taxonomic distribution of member sequences in complete prokaryotic proteomes (Bacteria and Archaea). At each taxonomic level the match value is indicated by a qualifier. The UniProtKB/Swiss-Prot identifier is indicated for each confirmed match; not yet verified is indicated for entries that are true members but are still in the TrEMBL section of the UniProt Knowledgebase; weak match found below threshold indicates a dubious match whereas (-) means that no match has been found for this taxon.

For Domain rules

This section displays the taxonomic distribution of member sequences in UniProtKB/Swiss-Prot. Positive hits, partial hits or false negatives are considered as member sequences. The number of match entries is indicated at each taxonomic level. Clicking on it allows to access match entrie(s).

Retrieve set of characterized or identified proteins for this family

For Protein rules only.
This section allows to get proteins with evidence at protein level and/or at transcript level. For more details about the criteria used to define Protein existence please refer to the document http://www.uniprot.org/docs/pe_criteria

Retrieve set of proteins with 3D structure

This section allows to get proteins whose three-dimensional structure (for Protein rules) or part of it (for Protein rules and Domain rules) has been resolved experimentally (for example by X-ray crystallography or NMR spectroscopy) and whose coordinates are available in the Protein Data Bank (PDB) database.

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