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HAMAP rule MF_00969

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General rule information [?]

Accession MF_00969
Dates 10-JUL-2013 (Created)
1-JUN-2023 (Last updated, Version 6)
Name TRCF
Scope(s) Bacteria
Template(s) P30958 (MFD_ECOLI); [ Recover all ]
Triggered by HAMAP; MF_00969 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier MFD
Protein name RecName: Full=Transcription-repair-coupling factor;
                 Short=TRCF;
                 EC=3.6.4.-;
Gene name Name=mfd;

Comments [?]

FUNCTIONCouples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site.
SUBCELLULAR LOCATIONCytoplasm.
SIMILARITYIn the N-terminal section; belongs to the UvrB family.
SIMILARITYIn the C-terminal section; belongs to the helicase family. RecG subfamily.

Keywords [?]


Gene Ontology [?]

GO:0005524; Molecular function:ATP binding
GO:0003677; Molecular function:DNA binding
GO:0006355; Biological process:regulation of DNA-templated transcription
GO:0000716; Biological process:transcription-coupled nucleotide-excision repair, DNA damage recognition
GO:0005737; Cellular component:cytoplasm

Cross-references [?]

PROSITE PS51192; HELICASE_ATP_BIND_1; 1;
PROSITE PS51194; HELICASE_CTER; 1;
Pfam PF02559; CarD_CdnL_TRCF; 1;
Pfam PF00270; DEAD; 1;
Pfam PF00271; Helicase_C; 1;
Pfam PF03461; TRCF; 1;
NCBIfam TIGR00580; mfd; 1;

Features [?]


Additional information [?]

Size range 700-1450 amino acids
Related rules None
Fusion Nter: None Cter: None



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