HAMAP rule MF_00335
General rule information
[?]
| Accession | MF_00335 |
| Dates | 1-JUN-2001 (Created)
1-JUN-2023 (Last updated, Version 36) |
| Name | RNase_Y |
| Scope(s) |
Bacteria |
| Template(s) | Q2FZ08 (RNY_STAA8); O31774 (RNY_BACSU); [ Recover all ] |
| Triggered by |
HAMAP; MF_00335 (Get profile general information and statistics) |
Propagated annotation
[?]
Identifier, protein and gene names
[?]
| Identifier | RNY |
| Protein name | RecName: Full=Ribonuclease Y; Short=RNase Y; EC=3.1.-.-; |
| Gene name | Name=rny; |
Comments
[?]
| FUNCTION | Endoribonuclease that initiates mRNA decay. |
| case <Feature:Transmembrane==1> | |
| SUBCELLULAR LOCATION | Cell membrane; Single-pass membrane protein. |
| end case | |
| SIMILARITY | Belongs to the RNase Y family. |
Keywords
[?]
| Endonuclease | |
| Hydrolase | |
| Nuclease | |
| RNA-binding | |
| case <Feature:Transmembrane==1> | |
| Cell membrane | |
| Membrane | |
| Transmembrane | |
| Transmembrane helix | |
| end case | |
Gene Ontology
[?]
| GO:0003723; Molecular function:RNA binding |
| GO:0004521; Molecular function:RNA endonuclease activity |
| GO:0006402; Biological process:mRNA catabolic process |
| GO:0005886; Cellular component:plasma membrane |
Cross-references
[?]
| Pfam | PF01966; HD; 1; |
| Pfam | PF00013; KH_1; 1; |
| NCBIfam | TIGR00277; HDIG; 1; |
| NCBIfam | TIGR03319; YmdA_YtgF; 1; |
| PROSITE | PS50084; KH_TYPE_1; 1; |
| PROSITE | PS51831; HD; 1; |
| General | Transmembrane; -; 0-1; |
Features
[?]
Additional information
[?]
| Size range | 469-650 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |