ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q9Y5R5


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name DMRT2_HUMAN
Primary accession number Q9Y5R5
Secondary accession numbers None
Integrated into Swiss-Prot on December 1, 2000
Sequence was last modified on November 1, 1999 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 62)
Name and origin of the protein
Protein name Doublesex- and mab-3-related transcription factor 2
Synonyms Doublesex-like 2 protein
DSXL-2
Gene name
Name: DMRT2
Synonyms: DSXL2
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Testis;
DOI=10.1093/hmg/8.6.989; PubMed=10332030 [NCBI, ExPASy, EBI, Israel, Japan]
Raymond C.S., Parker E.D., Kettlewell J.R., Brown L.G., Page D.C., Kusz K., Jaruzelska J., Reinberg Y., Flejter W.L., Bardwell V.J., Hirsch B., Zarkower D.;
"A region of human chromosome 9p required for testis development contains two genes related to known sexual regulators.";
Hum. Mol. Genet. 8:989-996(1999).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Kidney;
DOI=10.1006/geno.2000.6120; PubMed=10729224 [NCBI, ExPASy, EBI, Israel, Japan]
Ottolenghi C., Veitia R., Barbieri M., Fellous M., McElreavey K.;
"The human doublesex-related gene, DMRT2, is homologous to a gene involved in somitogenesis and encodes a potential bicistronic transcript.";
Genomics 64:179-186(2000).
[3]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Kidney;
DOI=10.1006/geno.2000.6160; PubMed=10857744 [NCBI, ExPASy, EBI, Israel, Japan]
Calvari V., Bertini V., De Grandi A., Peverali G., Zuffardi O., Ferguson-Smith M., Knudtzon J., Camerino G., Borsani G., Guioli S.;
"A new submicroscopic deletion that refines the 9p region for sex reversal.";
Genomics 65:203-212(2000).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF130729; AAD40475.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Y19052; CAB59891.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF284223; AAF86291.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF284224; AAF86293.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00001732; -.
RefSeq NP_001124337.1; -.
NP_006548.1; -.
NP_870987.2; -.
UniGene Hs.59506
3D structure databases
HSSP P23023; 1LPV. [HSSP ENTRY / PDB]
ModBase Q9Y5R5.
Organism-specific databases
GeneCards GC09P001040; -.
H-InvDB HIX0025707; -.
HGNC HGNC:2935; DMRT2.
GenAtlas DMRT2.
MIM 604935; gene. [NCBI / EBI]
Orphanet 242; Gonadal dysgenesis, XY female type.
PharmGKB PA27382; -.
Gene expression databases
ArrayExpress Q9Y5R5; -.
Bgee Q9Y5R5; -.
CleanEx HS_DMRT2; -.
GermOnline ENSG00000173253; Homo sapiens.
Ontologies
GO
GO:0005634; Cellular component: nucleus (inferred from electronic annotation from UniProtKB-SubCell).
GO:0003700; Molecular function: transcription factor activity (traceable author statement from ProtInc).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0008584; Biological process: male gonad development (traceable author statement from ProtInc).
GO:0006355; Biological process: regulation of transcription, DNA-dependent (inferred from electronic annotation from UniProtKB-KW).
GO:0007530; Biological process: sex determination (traceable author statement from ProtInc).
GO:0006350; Biological process: transcription (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001275; DM_DNA_bd.
Graphical view of domain structure.
Gene3D G3DSA:4.10.1040.10; DM_DNA_bd; 1.
Pfam PF00751; DM; 1.
Pfam graphical view of domain structure.
SMART SM00301; DM; 1.
SMART graphical view of domain structure.
PROSITE PS40000; DM_1; 1.
PS50809; DM_2; 1.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE Q9Y5R5; -.
Genome annotation databases
Ensembl ENSG00000173253; Homo sapiens. [Contig view]
GeneID 10655; -.
KEGG hsa:10655; -.
Phylogenomic databases
HOVERGEN Q9Y5R5; -.
Other
NextBio 40507; -.
SOURCE DMRT2; Homo sapiens.
ProtoNet Q9Y5R5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
DNA-binding; Metal-binding; Nucleus; Transcription; Transcription regulation; Zinc.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   226  226     Doublesex- and mab-3-related transcription factor 2. PRO_0000207048
DNA_BIND   119   165  47     DM. 
Sequence information
Length: 226 AA [This is the length of the unprocessed precursor] Molecular weight: 24469 Da [This is the MW of the unprocessed precursor] CRC64: D6DE6CB7EF5EDD43 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MADPQAGSAA GDWEIDVESL ELEEDVCGAP RSTPPGPSPP PADGDCEDDE DDDGVDEDAE 

        70         80         90        100        110        120 
EEGDGEEAGA SPGMPGQPEQ RGGPQPRPPL APQASPAGTG PRERCTPAGG GAEPRKLSRT 

       130        140        150        160        170        180 
PKCARCRNHG VVSCLKGHKR FCRWRDCQCA NCLLVVERQR VMAAQVALRR QQATEDKKGL 

       190        200        210        220 
SGKQNNFERK AVYQRQVRAP SLLAKSILEV LLGLFYSYYV YIMNHL 

Q9Y5R5 in FASTA format

View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ch flag SIB Switzerland Mirror sites: Australia  Brazil  Canada  China  Korea
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!