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UniProtKB/Swiss-Prot entry Q9XI00


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FB15_ARATH
Primary accession number Q9XI00
Secondary accession numbers None
Integrated into Swiss-Prot on January 23, 2007
Sequence was last modified on November 1, 1999 (Sequence version 1)
Annotations were last modified on    June 10, 2008 (Entry version 51)
Name and origin of the protein
Protein name F-box protein 7
Synonyms None
Gene name
Name: FBP7
OrderedLocusNames: At1g21760
ORFNames: F8K7.20
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048500; PubMed=11130712 [NCBI, ExPASy, EBI, Israel, Japan]
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
Nature 408:816-820(2000).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
[4]
FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, SUBCELLULAR LOCATION, INDUCTION, DOMAINS MD1 AND MD2, AND INTERACTION WITH SKP1A/ASK1; SKP1B/ASK2; ASK4; ASK11 AND ASK14.
DOI=10.1016/j.gene.2006.11.016; PubMed=17240087 [NCBI, ExPASy, EBI, Israel, Japan]
Calderon-Villalobos L.I.A., Nill C., Marrocco K., Kretsch T., Schwechheimer C.;
"The evolutionarily conserved Arabidopsis thaliana F-box protein AtFBP7 is required for efficient translation during temperature stress.";
Gene 392:106-116(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE005172; AAD41431.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT006427; AAP21235.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK228033; BAE99994.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR C86351; C86351.
RefSeq NP_564150.1; -.
UniGene At.71064
3D structure databases
ModBase Q9XI00.
Protein-protein interaction databases
IntAct Q9XI00; -.
Organism-specific databases
TAIR At1g21760; -.
Ontologies
GO
GO:0005739; Cellular component: mitochondrion (inferred from direct assay from TAIR).
GO:0005634; Cellular component: nucleus (inferred from direct assay from TAIR).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0006417; Biological process: regulation of translation (inferred from mutant phenotype from TAIR).
GO:0009409; Biological process: response to cold (inferred from mutant phenotype from TAIR).
GO:0009408; Biological process: response to heat (inferred from mutant phenotype from TAIR).
QuickGo view.
Family and domain databases
InterPro IPR001810; F-box.
Graphical view of domain structure.
Pfam PF00646; F-box; 1.
Pfam graphical view of domain structure.
SMART SM00256; FBOX; 1.
SMART graphical view of domain structure.
PROSITE PS50181; FBOX; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9XI00.
Genome annotation databases
GeneID 838780; -.
GenomeReviews CT485782_GR; AT1G21760.
KEGG ath:AT1G21760; -.
NMPDR fig|3702.1.peg.2537; -.
Other
ProtoNet Q9XI00.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Mitochondrion; Nucleus; Stress response; Ubl conjugation pathway.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   328  328     F-box protein 7. PRO_0000272205
DOMAIN   56   102  47     F-box. 
REGION   126   158  33     Mystery domain 1 (MD1). 
REGION   163   201  39     Mystery domain 2 (MD2). 
Sequence information
Length: 328 AA [This is the length of the unprocessed precursor] Molecular weight: 38043 Da [This is the MW of the unprocessed precursor] CRC64: 4A6CD30291D78908 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTSDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR 

        70         80         90        100        110        120 
CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR NACLKAWQTA GVIENYKILQ 

       130        140        150        160        170        180 
SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF 

       190        200        210        220        230        240 
LYKNSSQKLK DVAKYMNFKA SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL 

       250        260        270        280        290        300 
RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT 

       310        320 
AFVFVPFEEV DESVLNLPPE KMDYYVTG 

Q9XI00 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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