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UniProtKB/Swiss-Prot entry Q9S744

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CML9_ARATH
Primary accession number Q9S744
Secondary accession numbers None
Integrated into Swiss-Prot on December 20, 2005
Sequence was last modified on May 1, 2000 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 45)
Name and origin of the protein
Protein name Calmodulin-like protein 9
Synonym AtCaM-9
Gene name
Name: CML9
Synonyms: CAM9
OrderedLocusNames: At3g51920
ORFNames: F4F15.30
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND TISSUE SPECIFICITY.
STRAIN=cv. Columbia;
DOI=10.1007/s004250100636; PubMed=11855649 [NCBI, ExPASy, EBI, Israel, Japan]
Zielinski R.E.;
"Characterization of three new members of the Arabidopsis thaliana calmodulin gene family: conserved and highly diverged members of the gene family functionally complement a yeast calmodulin null.";
Planta 214:446-455(2002).
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048706; PubMed=11130713 [NCBI, ExPASy, EBI, Israel, Japan]
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.;
"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
Nature 408:820-822(2000).
[3]
 NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[4]
 GENE FAMILY, AND NOMENCLATURE.
DOI=10.1046/j.1469-8137.2003.00845.x
McCormack E., Braam J.;
"Calmodulins and related potential calcium sensors of Arabidopsis.";
New Phytol. 159:585-598(2003).
[5]
 INDUCTION.
DOI=10.1111/j.1469-8137.2004.01238.x; PubMed=15720654 [NCBI, ExPASy, EBI, Israel, Japan]
Lee D., Polisensky D.H., Braam J.;
"Genome-wide identification of touch- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes.";
New Phytol. 165:429-444(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF178075; AAD53315.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL049711; CAB41312.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF380635; AAK55716.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY054133; AAL06794.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T49071; T49071.
RefSeq NP_190760.1; -.
UniGene At.24807
3D structure databases
HSSP P62157; 1AK8. [HSSP ENTRY / PDB]
ModBase Q9S744.
Protein-protein interaction databases
IntAct Q9S744; -.
Organism-specific databases
GeneFarm 5186; -.
TAIR At3g51920; -.
Gene expression databases
GermOnline AT3G51920; Arabidopsis thaliana.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR011992; EF-Hand_type.
IPR002048; EF_hand_Ca_bd.
Graphical view of domain structure.
Gene3D G3DSA:1.10.238.10; EF-Hand_type; 1.
Pfam PF00036; efhand; 4.
Pfam graphical view of domain structure.
ProDom PD000012; EF-hand; 2.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00054; EFh; 4.
SMART graphical view of domain structure.
PROSITE PS00018; EF_HAND_1; 2.
PS50222; EF_HAND_2; 4.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9S744.
Genome annotation databases
GeneID 824355; -.
GenomeReviews BA000014_GR; AT3G51920.
KEGG ath:AT3G51920; -.
NMPDR fig|3702.1.peg.16450; -.
Other
ProtoNet Q9S744.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Methylation; Repeat.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   151  151     Calmodulin-like protein 9. PRO_0000073653
DOMAIN   8    43  36     EF-hand 1. 
DOMAIN   44    79  36     EF-hand 2. 
DOMAIN   81   116  36     EF-hand 3. 
DOMAIN   117   151  35     EF-hand 4. 
CA_BIND   94   105  12     1 (Potential). 
CA_BIND   130   141  12     2 (Potential). 
MOD_RES   116   116        N6,N6,N6-trimethyllysine (By similarity). 
Sequence information
Length: 151 AA [This is the length of the unprocessed precursor] Molecular weight: 17036 Da [This is the MW of the unprocessed precursor] CRC64: D6DEF91B10D0E48A [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MADAFTDEQI QEFYEAFCLI DKDSDGFITK EKLTKVMKSM GKNPKAEQLQ QMMSDVDIFG 

        70         80         90        100        110        120 
NGGITFDDFL YIMAQNTSQE SASDELIEVF RVFDRDGDGL ISQLELGEGM KDMGMKITAE 

       130        140        150 
EAEHMVREAD LDGDGFLSFH EFSKMMIAAS Y
Q9S744 in FASTA format

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