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UniProtKB/Swiss-Prot entry Q9Q2W5


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HN_NDVK
Primary accession number Q9Q2W5
Secondary accession numbers None
Integrated into Swiss-Prot on July 19, 2005
Sequence was last modified on May 1, 2000 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 47)
Name and origin of the protein
Protein name Hemagglutinin-neuraminidase
Synonym EC 3.2.1.18
Gene name
Name: HN
From
Newcastle disease virus (strain Kansas) (NDV) [TaxID: 332244] 
Taxonomy Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae; Paramyxovirinae; Avulavirus.
Virus host Gallus gallus (Chicken) [TaxID: 9031]
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
DOI=10.1006/viro.2000.0263; PubMed=10772993 [NCBI, ExPASy, EBI, Israel, Japan]
Takimoto T., Taylor G.L., Crennell S.J., Scroggs R.A., Portner A.;
"Crystallization of Newcastle disease virus hemagglutinin-neuraminidase glycoprotein.";
Virology 270:208-214(2000).
[2]
X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) OF 124-577.
DOI=10.1038/81002; PubMed=11062565 [NCBI, ExPASy, EBI, Israel, Japan]
Crennell S., Takimoto T., Portner A., Taylor G.;
"Crystal structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase.";
Nat. Struct. Biol. 7:1068-1074(2000).
Comments
  • FUNCTION: Attaches the virus to sialic acid-containing cell receptors and thereby initiating infection. Binding of HN protein to the receptor induces a conformational change that allows the F protein to trigger virion/cell membranes fusion (By similarity).
  • FUNCTION: Neuraminidase activity ensures the efficient spread of the virus by dissociating the mature virions from the neuraminic acid containing glycoproteins (By similarity).
  • CATALYTIC ACTIVITY: Hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
  • SUBCELLULAR LOCATION: Virion membrane; Single-pass type II membrane protein (Potential). Cell membrane; Single-pass type II membrane protein (Potential).
  • SIMILARITY: Belongs to the paramyxoviruses hemagglutinin-neuraminidase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF212323; AAF19984.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
PDB
1E8T; X-ray; 2.50 A; A/B=124-577.[ExPASy / RCSB / EBI]
1E8U; X-ray; 2.00 A; A/B=124-577.[ExPASy / RCSB / EBI]
1E8V; X-ray; 2.00 A; A/B=124-577.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1E8T; -.
1E8U; -.
1E8V; -.
ModBase Q9Q2W5.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0019031; Cellular component: viral envelope (inferred from electronic annotation from InterPro).
GO:0055036; Cellular component: virion membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0004308; Molecular function: exo-alpha-sialidase activity (inferred from electronic annotation from InterPro).
GO:0046789; Molecular function: host cell surface receptor binding (inferred from electronic annotation from InterPro).
GO:0019058; Biological process: viral infectious cycle (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR000665; Hemagglutn-neuramid_glycoprot.
IPR016285; Hemagglutn-neuramid_paramyxo.
Graphical view of domain structure.
Pfam PF00423; HN; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001072; Hemagglut-neuramid_paramyxoV; 1.
ProtoNet Q9Q2W5.
Other
LinkHub Q9Q2W5; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Cell membrane; Envelope protein; Glycoprotein; Hemagglutinin; Hydrolase; Membrane; Signal-anchor; Transmembrane; Virion.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   577  577     Hemagglutinin-neuraminidase. PRO_0000142614
TOPO_DOM   1    22  22     Cytoplasmic (Potential). 
TRANSMEM   23    45  23     Potential. 
TOPO_DOM   46   571  526     Extracellular (Potential). 
CARBOHYD   119   119        N-linked (GlcNAc...) (Potential). 
CARBOHYD   144   144        N-linked (GlcNAc...) (Potential). 
CARBOHYD   341   341        N-linked (GlcNAc...) (Potential). 
CARBOHYD   433   433        N-linked (GlcNAc...) (Potential). 
CARBOHYD   481   481        N-linked (GlcNAc...) (Potential). 
CARBOHYD   538   538        N-linked (GlcNAc...) (Potential). 
TURN   130   134  5      
STRAND   136   138  3      
STRAND   144   146  3      
HELIX   148   150  3      
STRAND   151   153  3      
STRAND   172   180  9      
STRAND   185   195  11      
STRAND   202   213  12      
STRAND   219   229  11      
STRAND   235   243  9      
STRAND   246   253  8      
HELIX   258   263  6      
STRAND   264   266  3      
STRAND   269   276  8      
STRAND   281   285  5      
HELIX   288   291  4      
TURN   292   294  3      
STRAND   295   300  6      
STRAND   306   308  3      
STRAND   311   320  10      
HELIX   325   330  6      
HELIX   348   357  10      
HELIX   362   364  3      
STRAND   368   377  10      
STRAND   379   381  3      
STRAND   387   389  3      
TURN   393   395  3      
STRAND   402   407  6      
STRAND   410   415  6      
STRAND   423   432  10      
STRAND   435   438  4      
STRAND   442   444  3      
STRAND   473   478  6      
STRAND   484   492  9      
STRAND   495   499  5      
STRAND   501   506  6      
STRAND   523   534  12      
TURN   535   538  4      
STRAND   539   549  11      
HELIX   551   553  3      
STRAND   557   567  11      
Sequence information
Length: 577 AA [This is the length of the unprocessed precursor] Molecular weight: 63111 Da [This is the MW of the unprocessed precursor] CRC64: 6A1F03C8DD3F7753 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MDRAVSQVAL ENDEREAKNT WRLIFRIAIL LLTVVTLATS VASLVYSMGA STPSDLVGIP 

        70         80         90        100        110        120 
TRISRAEEKI TSALGSNQDV VDRIYKQVAL ESPLALLNTE TTIMNAITSL SYQINGAANN 

       130        140        150        160        170        180 
SGWGAPIHDP DFIGGIGKEL IVDNASDVTS FYPSAFQEHL NFIPAPTTGS GCTRIPSFDM 

       190        200        210        220        230        240 
SATHYCYTHN VILSGCRDHS HSHQYLALGV LRTTATGRIF FSTLRSISLD DTQNRKSCSV 

       250        260        270        280        290        300 
SATPLGCDML CSKVTETEEE DYNSAVPTLM AHGRLGFDGQ YHEKDLDVTT LFEDWVANYP 

       310        320        330        340        350        360 
GVGGGSFIDG RVWFSVYGGL KPNSPSDTVQ EGKYVIYKRY NDTCPDEQDY QIRMAKSSYK 

       370        380        390        400        410        420 
PGRFGGKRIQ QAILSIKVST SLGEDPVLTV PPNTVTLMGA EGRILTVGTS HFLYQRGSSY 

       430        440        450        460        470        480 
FSPALLYPMT VSNKTATLHS PYTFNAFTRP GSIPCQASAR CPNSCVTGVY TDPYPLIFYR 

       490        500        510        520        530        540 
NHTLRGVFGT MLDSEQARLN PASAVFDSTS RSRITRVSSS STKAAYTTST CFKVVKTNKT 

       550        560        570 
YCLSIAEISN TLFGEFRIVP LLVEILKNDG VREARSG 

Q9Q2W5 in FASTA format

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