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UniProtKB/TrEMBL entry Q9LND7


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q9LND7_ARATH
Primary accession number Q9LND7
Secondary accession numbers None
Integrated into TrEMBL on October 1, 2000
Sequence was last modified on October 1, 2000 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 43)
Name and origin of the protein
Protein name T21E18.16 protein (Putative uncharacterized protein At1g06110) (At1g06110/T21E18_13)
Synonyms None
Gene name
OrderedLocusNames: At1g06110
ORFNames: T21E18.16
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE.
Sakano H., Vaysberg M., Lee J., Lenz C., Liu S.X., Pham P., Toriumi M., Yu G., Chin C., Chiou J., Choi E., Chung M., Gonzalez A., Howng B., Liu A., Altafi H., Brooks S., Buehler E., Chao Q., Conn L., Conway A.B., Hansen N.F., Johnson-Hopson C., Khan S., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J., Shinn P., Southwick A., Davis R.W., Ecker J.R., Federspiel N.A., Theologis A.;
"The sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1.";
Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE.
Nguyen M., Karlin-Neumann G., Southwick A., Tripp M., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE.
Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE.
Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Arabidopsis cDNA clones.";
Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AC024174; AAF80134.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF419599; AAL31931.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY099571; AAM20423.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT002142; AAN72153.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR D86196; D86196.
RefSeq NP_563759.1; -.
UniGene At.15468
3D structure databases
ModBase Q9LND7.
Protein-protein interaction databases
IntAct Q9LND7; -.
Organism-specific databases
TAIR At1g06110; -.
Gene expression databases
ArrayExpress Q9LND7; -.
Ontologies
GO
GO:0019005; Cellular component: SCF ubiquitin ligase complex (inferred from physical interaction from TAIR).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR007474; ApaG.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.1470; ApaG; 1.
Pfam PF04379; DUF525; 1.
Pfam graphical view of domain structure.
ProDom PD031761; ApaG; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS51087; APAG; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
GeneID 837120; -.
GenomeReviews CT485782_GR; AT1G06110.
KEGG ath:AT1G06110; -.
NMPDR fig|3702.1.peg.780; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome.
Features
None
Sequence information
Length: 436 AA Molecular weight: 48976 Da CRC64: 2FF2D4AAC5478259 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGLEDAGDLV LHIVLSKIGP ENTARVACVS KRLKVSASEE SLWSIFCSND LNISTPLDPH 

        70         80         90        100        110        120 
GDPAPSFKRA YQLWRESFRM YPWNLVKRVR LCWDNLKQWL TLNFPEAKAT LRKGVTEDDL 

       130        140        150        160        170        180 
QEFETSLKVK LPLPTRLLYR FVDGQELSSP NGLDGSLGLI GGYSAYSHDV NVYLLPLKEV 

       190        200        210        220        230        240 
MRETKESFMR DLGFSSRLDL IVMAASVVAS LKIFLLDCTT GQLFTGTSNR QLLPCVPDAL 

       250        260        270        280        290        300 
VRSVHDTNGD QQQDAMLLWL EEHGRRLQTG TINVRQQNNV KSISLFPEIP PLCSVSVTNG 

       310        320        330        340        350        360 
VQVRASSVFI PEISNLRDQP PAYWYAYSIR MSLMPEGCIL NGTHHSSCQL YWRHWVIRAD 

       370        380        390        400        410        420 
NEVIDNVNGE AVIGKYPLLQ AGEEEFVYES CSSFPTTAGS IDGSFTFVPG SLRDPKGSQF 

       430 
EVKVVEFPLE LPDYIF 

Q9LND7 in FASTA format

View entry in original UniProtKB/TrEMBL format
View entry in raw text format (no links)
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