ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q9LLH9


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name ACOX3_ARATH
Primary accession number Q9LLH9
Secondary accession numbers Q9C839 Q9LKX5 Q9LMI8 Q9M7X6
Integrated into Swiss-Prot on March 29, 2005
Sequence was last modified on March 29, 2005 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 48)
Name and origin of the protein
Protein name Acyl-coenzyme A oxidase 3, peroxisomal [Precursor]
Synonyms AOX 3
EC 1.3.3.6
Medium-chain acyl-CoA oxidase
AtCX3
Gene name
Name: ACX3
OrderedLocusNames: At1g06290, At1g06300
ORFNames: F9P14_11, F9P14.15, T2D23.1, F3E22.17, T8E24.15
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], CHARACTERIZATION, TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
STRAIN=cv. No-0;
DOI=10.1104/pp.123.2.733; PubMed=10859203 [NCBI, ExPASy, EBI, Israel, Japan]
Froman B.E., Edwards P.C., Bursch A.G., Dehesh K.;
"ACX3, a novel medium-chain acyl-coenzyme A oxidase from Arabidopsis.";
Plant Physiol. 123:733-742(2000).
[2]
NUCLEOTIDE SEQUENCE [MRNA], CHARACTERIZATION, TISSUE SPECIFICITY, AND SUBCELLULAR LOCATION.
STRAIN=cv. Columbia;
TISSUE=Hypocotyl;
DOI=10.1074/jbc.M004945200; PubMed=10918060 [NCBI, ExPASy, EBI, Israel, Japan]
Eastmond P.J., Hooks M.A., Williams D., Lange P., Bechtold N., Sarrobert C., Nussaume L., Graham I.A.;
"Promoter trapping of a novel medium-chain acyl-CoA oxidase, which is induced transcriptionally during Arabidopsis seed germination.";
J. Biol. Chem. 275:34375-34381(2000).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048500; PubMed=11130712 [NCBI, ExPASy, EBI, Israel, Japan]
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
Nature 408:816-820(2000).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
[6]
INDUCTION.
DOI=10.1104/pp.104.039925; PubMed=15141068 [NCBI, ExPASy, EBI, Israel, Japan]
Cruz-Castillo M., Martinez C., Buchala A., Metraux J.-P., Leon J.;
"Gene-specific involvement of beta-oxidation in wound-activated responses in Arabidopsis.";
Plant Physiol. 135:85-94(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF207994; AAF73843.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF253474; AAF76137.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AC068143; AAF82159.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AC036106; AAG50996.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AC023912; AAF63829.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY099579; AAM20431.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT008413; AAP37772.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK176257; BAD44020.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR G86198; G86198.
RefSeq NP_172119.1; -.
UniGene At.14938
3D structure databases
HSSP P07872; 1IS2. [HSSP ENTRY / PDB]
ModBase Q9LLH9.
Organism-specific databases
TAIR At1g06290; -.
Gene expression databases
GermOnline AT1G06290; Arabidopsis thaliana.
Ontologies
GO
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR006091; Acyl-CoA_DHase/Oxase_M.
IPR006090; Acyl-CoA_Oxase/DHase_1.
IPR012258; Acyl-CoA_oxidase.
IPR002655; Acyl_CoA_ox_C.
IPR013764; AcylCoA_oxidase/DH_1/2_C.
Graphical view of domain structure.
Gene3D G3DSA:2.40.110.10; Acyl_CoA_DH/ox_M; 1.
G3DSA:1.20.140.10; AcylCoA_DH_1/2_C; 2.
PANTHER PTHR10909:SF11; Acyl-CoA_oxidase; 1.
Pfam PF01756; ACOX; 1.
PF00441; Acyl-CoA_dh_1; 1.
PF02770; Acyl-CoA_dh_M; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000168; Acyl-CoA_oxidase; 1.
BLOCKS Q9LLH9.
ProtoNet Q9LLH9.
Genome annotation databases
GeneID 837140; -.
GenomeReviews CT485782_GR; AT1G06290.
KEGG ath:AT1G06290; -.
NMPDR fig|3702.1.peg.805; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Fatty acid metabolism; Flavoprotein; Lipid metabolism; Oxidoreductase; Peroxisome; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1    34  34     Peroxisome (Potential). 
CHAIN   35   675  641     Acyl-coenzyme A oxidase 3, peroxisomal. PRO_0000000557
NP_BIND   442   457  16     FAD (Potential). 
CONFLICT   33    33        L -> V (in Ref. 1; AAF73843). 
CONFLICT   578   578        I -> M (in Ref. 3; AAG50996). 
CONFLICT   671   671        A -> T (in Ref. 3; AAG50996/AAF63829). 
Sequence information
Length: 675 AA [This is the length of the unprocessed precursor] Molecular weight: 75676 Da [This is the MW of the unprocessed precursor] CRC64: FABBCBA01C5FC103 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH 

        70         80         90        100        110        120 
NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ REITMKRIWY LLENGVFKGW 

       130        140        150        160        170        180 
LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY 

       190        200        210        220        230        240 
VVKGCFAMTE LGHGSNVRGI ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF 

       250        260        270        280        290        300 
SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN 

       310        320        330        340        350        360 
LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS 

       370        380        390        400        410        420 
RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN ELKMIYVKRT PETNKAIHVV 

       430        440        450        460        470        480 
SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK 

       490        500        510        520        530        540 
ALFAEYVSCK KRNKPFKGLG LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ 

       550        560        570        580        590        600 
FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL 

       610        620        630        640        650        660 
VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS 

       670 
PIAFNWVEAN AWSSV 

Q9LLH9 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by au flag APAF Australia Mirror sites: Brazil  Canada  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!