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UniProtKB/Swiss-Prot entry Q9JJZ4


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name UB2J1_MOUSE
Primary accession number Q9JJZ4
Secondary accession number Q9DC92
Integrated into Swiss-Prot on September 13, 2004
Sequence was last modified on September 13, 2004 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 56)
Name and origin of the protein
Protein name Ubiquitin-conjugating enzyme E2 J1
Synonyms EC 6.3.2.19
Non-canonical ubiquitin-conjugating enzyme 1
NCUBE1
Gene name
Name: Ube2j1
Synonyms: Ncube1
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1006/bbrc.2000.2302; PubMed=10708578 [NCBI, ExPASy, EBI, Israel, Japan]
Lester D.H., Farquharson C., Russell G.C., Houston B.;
"Identification of a family of non-canonical ubiquitin-conjugating enzymes structurally related to yeast UBC6.";
Biochem. Biophys. Res. Commun. 269:474-480(2000).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J;
TISSUE=Brain, and Testis;
DOI=10.1126/science.1112014; PubMed=16141072 [NCBI, ExPASy, EBI, Israel, Japan]
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J., Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=FVB/N;
TISSUE=Colon;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-266, AND MASS SPECTROMETRY.
TISSUE=Liver;
DOI=10.1074/mcp.M600218-MCP200; PubMed=17208939 [NCBI, ExPASy, EBI, Israel, Japan]
Lee J., Xu Y., Chen Y., Sprung R., Kim S.C., Xie S., Zhao Y.;
"Mitochondrial phosphoproteome revealed by an improved IMAC method and MS/MS/MS.";
Mol. Cell. Proteomics 6:669-676(2007).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-266, AND MASS SPECTROMETRY.
TISSUE=Liver;
DOI=10.1073/pnas.0609836104; PubMed=17242355 [NCBI, ExPASy, EBI, Israel, Japan]
Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P.;
"Large-scale phosphorylation analysis of mouse liver.";
Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ245899; CAB83217.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK003050; BAB22532.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK031669; BAC27502.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC024623; AAH24623.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_062532.2; -.
UniGene Mm.259095
3D structure databases
HSSP P15731; 1QCQ. [HSSP ENTRY / PDB]
ModBase Q9JJZ4.
PTM databases
PhosphoSite Q9JJZ4; -.
Organism-specific databases
MGI MGI:1926245; Ube2j1.
Gene expression databases
ArrayExpress Q9JJZ4; -.
CleanEx MM_UBE2J1; -.
GermOnline ENSMUSG00000028277; Mus musculus.
Family and domain databases
InterPro IPR016135; UBQ-conjugat/RWD-like.
IPR000608; UBQ-conjugat_E2.
Graphical view of domain structure.
Gene3D G3DSA:3.10.110.10; UBQ-conjugat_E2; 1.
PANTHER PTHR11621; UBQ-conjugat_E2; 1.
Pfam PF00179; UQ_con; 1.
Pfam graphical view of domain structure.
ProDom PD000461; UBQ_conjugat; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00212; UBCc; 1.
SMART graphical view of domain structure.
PROSITE PS00183; UBIQUITIN_CONJUGAT_1; FALSE_NEG.
PS50127; UBIQUITIN_CONJUGAT_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9JJZ4.
Genome annotation databases
Ensembl ENSMUSG00000028277; Mus musculus. [Contig view]
GeneID 56228; -.
KEGG mmu:56228; -.
Phylogenomic databases
HOGENOM Q9JJZ4; -.
HOVERGEN Q9JJZ4; -.
Other
SOURCE Ube2j1; Mus musculus.
ProtoNet Q9JJZ4.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Endoplasmic reticulum; Ligase; Membrane; Phosphoprotein; Transmembrane; Ubl conjugation pathway.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   318  318     Ubiquitin-conjugating enzyme E2 J1. PRO_0000082595
TOPO_DOM   1   282  282     Cytoplasmic (Potential). 
TRANSMEM   283   303  21     Anchor for type IV membrane protein (Potential). 
TOPO_DOM   304   318  15     Lumenal (Potential). 
ACT_SITE   91    91        Glycyl thioester intermediate (By similarity). 
MOD_RES   266   266        Phosphoserine. 
MOD_RES   268   268        Phosphoserine (By similarity). 
CONFLICT   286   286        G -> V (in Ref. 1; CAB83217). 
CONFLICT   289   289        M -> V (in Ref. 1; CAB83217). 
Sequence information
Length: 318 AA [This is the length of the unprocessed precursor] Molecular weight: 34990 Da [This is the MW of the unprocessed precursor] CRC64: 61A409ADF397EA36 [This is a checksum on the sequence]
        10         20         30         40         50         60 
METRYNLKSP AVKRLMKEAA ELKDPTDHYH AQPLEDNLFE WHFTVRGPPD SDFDGGVYHG 

        70         80         90        100        110        120 
RIVLPPEYPM KPPSIILLTA NGRFEVGKKI CLSISGHHPE TWQPSWSIRT ALLAIIGFMP 

       130        140        150        160        170        180 
TKGEGAIGSL DYTPEERRAL AKKSQDFCCE GCGSAMKDVL LPLKSGSGSS QADQEAKELA 

       190        200        210        220        230        240 
RQISFKAEVN SSGKTIAESD LNQCFSLNDS QDDLPTTFQG ATASTSYGAQ NPSGAPLPQP 

       250        260        270        280        290        300 
TQPAPKNTSM SPRQRRAQQQ SQRRPSTSPD VLQGQPPRAH HTEHGGSAML IIILTLALAA 

       310 
LIFRRIYLAN EYIFDFEL 

Q9JJZ4 in FASTA format

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