[1]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
STRAIN=cv. Columbia;
DOI=10.1007/s004380050321; PubMed=9003312 [NCBI, ExPASy, EBI, Israel, Japan]
Hoffman P.D.,
Batschauer A.,
Hays J.B.;
"PHH1, a novel gene from Arabidopsis thaliana that encodes a protein similar to plant blue-light photoreceptors and microbial photolyases.";
Mol. Gen. Genet. 253:259-265(1996).
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[2]
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NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Columbia;
Lin C.,
Ahmad M.,
Chan J.,
Cashmore A.R.;
"CRY2: a second member of the Arabidopsis cryptochrome gene family.";
(er) Plant Gene Register PGR96-001.
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[3]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
STRAIN=cv. Cvi-0, and cv. Landsberg erecta;
DOI=10.1038/ng767; PubMed=11726930 [NCBI, ExPASy, EBI, Israel, Japan]
El-Din El-Assal S.,
Alonso-Blanco C.,
Peeters A.J.M.,
Raz V.,
Koornneef M.;
"A QTL for flowering time in Arabidopsis reveals a novel allele of CRY2.";
Nat. Genet. 29:435-440(2001).
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[4]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=cv. Bla-10, cv. Bsch-0, cv. Bu-0, cv. Bu-2, cv. Chi-1, cv. Co-1, cv. Columbia, cv. Cvi-0, cv. Da(1)-12, cv. Di-G, cv. El-0, cv. Fe-1, cv. Gr-3, cv. Hn-0, cv. Kon, cv. Kr-0, cv. Landsberg erecta, cv. Le-0, cv. Li-3, cv. Lip-0, cv. Lz-0, cv. Mrk-0, cv. Mt-0, cv. Mz-0, cv. Ove-0, cv. PHW-1, cv. PHW-32, cv. PHW-36, cv. Sha, cv. Stw-0, cv. Ta-0, and cv. Wassilewskija-3;
DOI=10.1007/s00239-007-9063-3; PubMed=18273534 [NCBI, ExPASy, EBI, Israel, Japan]
Moore R.C.,
Stevens M.H.;
"Local patterns of nucleotide polymorphism are highly variable in the selfing species Arabidopsis thaliana.";
J. Mol. Evol. 66:116-129(2008).
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[5]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048500; PubMed=11130712 [NCBI, ExPASy, EBI, Israel, Japan]
Theologis A.,
Ecker J.R.,
Palm C.J.,
Federspiel N.A.,
Kaul S.,
White O.,
Alonso J.,
Altafi H.,
Araujo R.,
Bowman C.L.,
Brooks S.Y.,
Buehler E.,
Chan A.,
Chao Q.,
Chen H.,
Cheuk R.F.,
Chin C.W.,
Chung M.K.,
Conn L., ![]()
Conway A.B.,
Conway A.R.,
Creasy T.H.,
Dewar K.,
Dunn P.,
Etgu P.,
Feldblyum T.V.,
Feng J.-D.,
Fong B.,
Fujii C.Y.,
Gill J.E.,
Goldsmith A.D.,
Haas B.,
Hansen N.F.,
Hughes B.,
Huizar L.,
Hunter J.L.,
Jenkins J.,
Johnson-Hopson C.,
Khan S.,
Khaykin E.,
Kim C.J.,
Koo H.L.,
Kremenetskaia I.,
Kurtz D.B.,
Kwan A.,
Lam B.,
Langin-Hooper S.,
Lee A.,
Lee J.M.,
Lenz C.A.,
Li J.H.,
Li Y.-P.,
Lin X.,
Liu S.X.,
Liu Z.A.,
Luros J.S.,
Maiti R.,
Marziali A.,
Militscher J.,
Miranda M.,
Nguyen M.,
Nierman W.C.,
Osborne B.I.,
Pai G.,
Peterson J.,
Pham P.K.,
Rizzo M.,
Rooney T.,
Rowley D.,
Sakano H.,
Salzberg S.L.,
Schwartz J.R.,
Shinn P.,
Southwick A.M.,
Sun H.,
Tallon L.J.,
Tambunga G.,
Toriumi M.J.,
Town C.D.,
Utterback T.,
Van Aken S.,
Vaysberg M.,
Vysotskaia V.S.,
Walker M.,
Wu D.,
Yu G.,
Fraser C.M.,
Venter J.C.,
Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
Nature 408:816-820(2000).
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[6]
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NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K.,
Lim J.,
Dale J.M.,
Chen H.,
Shinn P.,
Palm C.J.,
Southwick A.M.,
Wu H.C.,
Kim C.J.,
Nguyen M.,
Pham P.K.,
Cheuk R.F.,
Karlin-Newmann G.,
Liu S.X.,
Lam B.,
Sakano H.,
Wu T.,
Yu G.,
Miranda M., ![]()
Quach H.L.,
Tripp M.,
Chang C.H.,
Lee J.M.,
Toriumi M.J.,
Chan M.M.,
Tang C.C.,
Onodera C.S.,
Deng J.M.,
Akiyama K.,
Ansari Y.,
Arakawa T.,
Banh J.,
Banno F.,
Bowser L.,
Brooks S.Y.,
Carninci P.,
Chao Q.,
Choy N.,
Enju A.,
Goldsmith A.D.,
Gurjal M.,
Hansen N.F.,
Hayashizaki Y.,
Johnson-Hopson C.,
Hsuan V.W.,
Iida K.,
Karnes M.,
Khan S.,
Koesema E.,
Ishida J.,
Jiang P.X.,
Jones T.,
Kawai J.,
Kamiya A.,
Meyers C.,
Nakajima M.,
Narusaka M.,
Seki M.,
Sakurai T.,
Satou M.,
Tamse R.,
Vaysberg M.,
Wallender E.K.,
Wong C.,
Yamamura Y.,
Yuan S.,
Shinozaki K.,
Davis R.W.,
Theologis A.,
Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
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[7]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 2-612.
STRAIN=cv. Bla-10, cv. Bsch-0, cv. Bu-0, cv. Bu-2, cv. Chi-1, cv. Co-1, cv. Cvi-0, cv. Da(1)-12, cv. Di-G, cv. El-0, cv. Fe-1, cv. Gr-3, cv. Hn-0, cv. Kon, cv. Kr-0, cv. Landsberg erecta, cv. Le-0, cv. Li-3, cv. Lip-0, cv. Lz-0, cv. Mrk-0, cv. Mt-0, cv. Mz-0, cv. Ove-0, cv. Oy-1, cv. PHW-1, cv. PHW-33, cv. PHW-36, cv. Sha, cv. Stw-0, and cv. Ta-0;
DOI=10.1534/genetics.103.024950; PubMed=15280248 [NCBI, ExPASy, EBI, Israel, Japan]
Olsen K.M.,
Halldorsdottir S.S.,
Stinchcombe J.R.,
Weinig C.,
Schmitt J.,
Purugganan M.D.;
"Linkage disequilibrium mapping of Arabidopsis CRY2 flowering time alleles.";
Genetics 167:1361-1369(2004).
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[8]
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NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 485-612.
STRAIN=cv. Columbia;
Totoki Y.,
Seki M.,
Ishida J.,
Nakajima M.,
Enju A.,
Kamiya A.,
Narusaka M.,
Shin-i T.,
Nakagawa M.,
Sakamoto N.,
Oishi K.,
Kohara Y.,
Kobayashi M.,
Toyoda A.,
Sakaki Y.,
Sakurai T.,
Iida K.,
Akiyama K.,
Satou M., ![]()
Toyoda T.,
Konagaya A.,
Carninci P.,
Kawai J.,
Hayashizaki Y.,
Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
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[9]
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FUNCTION, AND MUTAGENESIS OF GLY-337.
DOI=10.1038/33701; PubMed=9565033 [NCBI, ExPASy, EBI, Israel, Japan]
Ahmad M.,
Jarillo J.A.,
Smirnova O.,
Cashmore A.R.;
"Cryptochrome blue-light photoreceptors of Arabidopsis implicated in phototropism.";
Nature 392:720-723(1998).
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[10]
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PHOSPHORYLATION.
DOI=10.1016/S1097-2765(00)80094-5; PubMed=9651577 [NCBI, ExPASy, EBI, Israel, Japan]
Ahmad M.,
Jarillo J.A.,
Smirnova O.,
Cashmore A.R.;
"The CRY1 blue light photoreceptor of Arabidopsis interacts with phytochrome A in vitro.";
Mol. Cell 1:939-948(1998).
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[11]
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FUNCTION.
DOI=10.1073/pnas.95.5.2686; PubMed=9482948 [NCBI, ExPASy, EBI, Israel, Japan]
Lin C.,
Yang H.,
Guo H.,
Mockler T.,
Chen J.,
Cashmore A.R.;
"Enhancement of blue-light sensitivity of Arabidopsis seedlings by a blue light receptor cryptochrome 2.";
Proc. Natl. Acad. Sci. U.S.A. 95:2686-2690(1998).
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[12]
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SUBCELLULAR LOCATION.
PubMed=10476076 [NCBI, ExPASy, EBI, Israel, Japan]
Kleiner O.,
Kircher S.,
Harter K.,
Batschauer A.;
"Nuclear localization of the Arabidopsis blue light receptor cryptochrome 2.";
Plant J. 19:289-296(1999).
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[13]
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INTERACTION WITH PHYB.
DOI=10.1038/35041583; PubMed=11089975 [NCBI, ExPASy, EBI, Israel, Japan]
Mas P.,
Devlin P.F.,
Panda S.,
Kay S.A.;
"Functional interaction of phytochrome B and cryptochrome 2.";
Nature 408:207-211(2000).
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[14]
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INTERACTION WITH COP1.
DOI=10.1126/science.1063630; PubMed=11509693 [NCBI, ExPASy, EBI, Israel, Japan]
Wang H.,
Ma L.-G.,
Li J.-M.,
Zhao H.-Y.,
Deng X.W.;
"Direct interaction of Arabidopsis cryptochromes with COP1 in light control development.";
Science 294:154-158(2001).
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[15]
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PHOSPHORYLATION.
DOI=10.1038/nature00815; PubMed=12066190 [NCBI, ExPASy, EBI, Israel, Japan]
Shalitin D.,
Yang H.,
Mockler T.C.,
Maymon M.,
Guo H.,
Whitelam G.C.,
Lin C.;
"Regulation of Arabidopsis cryptochrome 2 by blue-light-dependent phosphorylation.";
Nature 417:763-767(2002).
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[16]
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FUNCTION.
DOI=10.1104/pp.103.029819; PubMed=14605222 [NCBI, ExPASy, EBI, Israel, Japan]
El-Din El-Assal S.,
Alonso-Blanco C.,
Peeters A.J.,
Wagemaker C.,
Weller J.L.,
Koornneef M.;
"The role of cryptochrome 2 in flowering in Arabidopsis.";
Plant Physiol. 133:1504-1516(2003).
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[17]
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INDUCTION.
DOI=10.1073/pnas.0437826100; PubMed=12578985 [NCBI, ExPASy, EBI, Israel, Japan]
Mockler T.,
Yang H.,
Yu X.,
Parikh D.,
Cheng Y.C.,
Dolan S.,
Lin C.;
"Regulation of photoperiodic flowering by Arabidopsis photoreceptors.";
Proc. Natl. Acad. Sci. U.S.A. 100:2140-2145(2003).
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[18]
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FUNCTION.
DOI=10.1073/pnas.0501011102; PubMed=16093319 [NCBI, ExPASy, EBI, Israel, Japan]
Mao J.,
Zhang Y.C.,
Sang Y.,
Li Q.H.,
Yang H.Q.;
"A role for Arabidopsis cryptochromes and COP1 in the regulation of stomatal opening.";
Proc. Natl. Acad. Sci. U.S.A. 102:12270-12275(2005).
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[19]
|
FUNCTION.
DOI=10.1007/s00425-006-0280-6; PubMed=16703358 [NCBI, ExPASy, EBI, Israel, Japan]
Canamero R.C.,
Bakrim N.,
Bouly J.-P.,
Garay A.,
Dudkin E.E.,
Habricot Y.,
Ahmad M.;
"Cryptochrome photoreceptors cry1 and cry2 antagonistically regulate primary root elongation in Arabidopsis thaliana.";
Planta 224:995-1003(2006).
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[20]
|
COFACTOR.
DOI=10.1074/jbc.M700616200; PubMed=17355959 [NCBI, ExPASy, EBI, Israel, Japan]
Banerjee R.,
Schleicher E.,
Meier S.,
Viana R.M.,
Pokorny R.,
Ahmad M.,
Bittl R.,
Batschauer A.;
"The signaling state of Arabidopsis cryptochrome 2 contains flavin semiquinone.";
J. Biol. Chem. 282:14916-14922(2007).
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[21]
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FUNCTION.
DOI=10.1111/j.1365-313X.2007.03093.x; PubMed=17470059 [NCBI, ExPASy, EBI, Israel, Japan]
Tessadori F.,
Schulkes R.K.,
van Driel R.,
Fransz P.;
"Light-regulated large-scale reorganization of chromatin during the floral transition in Arabidopsis.";
Plant J. 50:848-857(2007).
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[22]
|
SUBCELLULAR LOCATION, SUBUNIT, AND PHOSPHORYLATION.
DOI=10.1073/pnas.0701912104; PubMed=17438275 [NCBI, ExPASy, EBI, Israel, Japan]
Yu X.,
Shalitin D.,
Liu X.,
Maymon M.,
Klejnot J.,
Yang H.,
Lopez J.,
Zhao X.,
Bendehakkalu K.T.,
Lin C.;
"Derepression of the NC80 motif is critical for the photoactivation of Arabidopsis CRY2.";
Proc. Natl. Acad. Sci. U.S.A. 104:7289-7294(2007).
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[23]
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SUBCELLULAR LOCATION, UBIQUITINATION, AND PHOSPHORYLATION.
DOI=10.1105/tpc.107.053017; PubMed=17965271 [NCBI, ExPASy, EBI, Israel, Japan]
Yu X.,
Klejnot J.,
Zhao X.,
Shalitin D.,
Maymon M.,
Yang H.,
Lee J.,
Liu X.,
Lopez J.,
Lin C.;
"Arabidopsis cryptochrome 2 completes its posttranslational life cycle in the nucleus.";
Plant Cell 19:3146-3156(2007).
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[24]
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FUNCTION.
DOI=10.1105/tpc.106.048157; PubMed=17259260 [NCBI, ExPASy, EBI, Israel, Japan]
Endo M.,
Mochizuki N.,
Suzuki T.,
Nagatani A.;
"CRYPTOCHROME2 in vascular bundles regulates flowering in Arabidopsis.";
Plant Cell 19:84-93(2007).
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