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UniProtKB/Swiss-Prot entry Q92905


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CSN5_HUMAN
Primary accession number Q92905
Secondary accession numbers O15386 Q6AW95 Q86WQ4 Q9BQ17
Integrated into Swiss-Prot on November 23, 2004
Sequence was last modified on January 23, 2007 (Sequence version 4)
Annotations were last modified on    July 22, 2008 (Entry version 67)
Name and origin of the protein
Protein name COP9 signalosome complex subunit 5
Synonyms Signalosome subunit 5
SGN5
EC 3.4.-.-
Jun activation domain-binding protein 1
Gene name
Name: COPS5
Synonyms: CSN5, JAB1
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND INTERACTION WITH JUN.
DOI=10.1038/383453a0; PubMed=8837781 [NCBI, ExPASy, EBI, Israel, Japan]
Claret F.-X., Hibi M., Dhut S., Toda T., Karin M.;
"A new group of conserved coactivators that increase the specificity of AP-1 transcription factors.";
Nature 383:453-457(1996).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1074/jbc.272.43.27042; PubMed=9341143 [NCBI, ExPASy, EBI, Israel, Japan]
Asano K., Vornlocher H.-P., Richter-Cook N.J., Merrick W.C., Hinnebusch A.G., Hershey J.W.B.;
"Structure of cDNAs encoding human eukaryotic initiation factor 3 subunits. Possible roles in RNA binding and macromolecular assembly.";
J. Biol. Chem. 272:27042-27052(1997).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Halleck A., Ebert L., Mkoundinya M., Schick M., Eisenstein S., Neubert P., Kstrang K., Schatten R., Shen B., Henze S., Mar W., Korn B., Zuo D., Hu Y., LaBaer J.;
"Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201).";
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Brain, Eye, and Muscle;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-47.
TISSUE=Liver;
The German cDNA consortium;
Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
[6]
PROTEIN SEQUENCE OF 2-11; 57-64; 181-187; 237-244 AND 273-282, CLEAVAGE OF INITIATOR METHIONINE, ACETYLATION AT ALA-2, AND MASS SPECTROMETRY.
TISSUE=Cervix carcinoma;
Bienvenut W.V., Quadroni M.;
Submitted (OCT-2005) to UniProtKB.
[7]
NUCLEOTIDE SEQUENCE [MRNA] OF 146-334.
Hu W., Tian J.;
"The fusion gene of human Jun activation domain binding protein and membrane cofactor protein which cloned from multiple myeloma cell line ARH-77.";
Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
[8]
PARTIAL PROTEIN SEQUENCE, FUNCTION, AND SUBCELLULAR LOCATION.
PubMed=9535219 [NCBI, ExPASy, EBI, Israel, Japan]
Seeger M., Kraft R., Ferrell K., Bech-Otschir D., Dumdey R., Schade R., Gordon C., Naumann M., Dubiel W.;
"A novel protein complex involved in signal transduction possessing similarities to 26S proteasome subunits.";
FASEB J. 12:469-478(1998).
[9]
INTERACTION WITH BCL3.
DOI=10.1038/sj.onc.1202717; PubMed=10362352 [NCBI, ExPASy, EBI, Israel, Japan]
Dechend R., Hirano F., Lehmann K., Heissmeyer V., Ansieau S., Wulczyn F.G., Scheidereit C., Leutz A.;
"The Bcl-3 oncoprotein acts as a bridging factor between NF-kappaB/Rel and nuclear co-regulators.";
Oncogene 18:3316-3323(1999).
[10]
INTERACTION WITH NCOA1 AND PGR.
DOI=10.1074/jbc.275.12.8540; PubMed=10722692 [NCBI, ExPASy, EBI, Israel, Japan]
Chauchereau A., Georgiakaki M., Perrin-Wolff M., Milgrom E., Loosfelt H.;
"JAB1 interacts with both the progesterone receptor and SRC-1.";
J. Biol. Chem. 275:8540-8548(2000).
[11]
INTERACTION WITH MIF.
DOI=10.1038/35041591; PubMed=11089976 [NCBI, ExPASy, EBI, Israel, Japan]
Kleemann R., Hausser A., Geiger G., Mischke R., Burger-Kentischer A., Flieger O., Johannes F.-J., Roger T., Calandra T., Kapurniotu A., Grell M., Finkelmeier D., Brunner H., Bernhagen J.;
"Intracellular action of the cytokine MIF to modulate AP-1 activity and the cell cycle through Jab1.";
Nature 408:211-216(2000).
[12]
INTERACTION WITH ITGB2.
DOI=10.1038/35007098; PubMed=10766246 [NCBI, ExPASy, EBI, Israel, Japan]
Bianchi E., Denti S., Granata A., Bossi G., Geginat J., Villa A., Rogge L., Pardi R.;
"Integrin LFA-1 interacts with the transcriptional co-activator JAB1 to modulate AP-1 activity.";
Nature 404:617-621(2000).
[13]
FUNCTION, AND INTERACTION WITH TP53.
DOI=10.1093/emboj/20.7.1630; PubMed=11285227 [NCBI, ExPASy, EBI, Israel, Japan]
Bech-Otschir D., Kraft R., Huang X., Henklein P., Kapelari B., Pollmann C., Dubiel W.;
"COP9 signalosome-specific phosphorylation targets p53 to degradation by the ubiquitin system.";
EMBO J. 20:1630-1639(2001).
[14]
FUNCTION, AND COMPOSITION OF THE CSN COMPLEX.
DOI=10.1126/science.1059780; PubMed=11337588 [NCBI, ExPASy, EBI, Israel, Japan]
Lyapina S., Cope G., Shevchenko A., Serino G., Tsuge T., Zhou C., Wolf D.A., Wei N., Shevchenko A., Deshaies R.J.;
"Promotion of NEDD-CUL1 conjugate cleavage by COP9 signalosome.";
Science 292:1382-1385(2001).
[15]
INTERACTION WITH SMAD4.
DOI=10.1093/embo-reports/kvf024; PubMed=11818334 [NCBI, ExPASy, EBI, Israel, Japan]
Wan M., Cao X., Wu Y., Bai S., Wu L., Shi X., Wang N., Cao X.;
"Jab1 antagonizes TGF-beta signaling by inducing Smad4 degradation.";
EMBO Rep. 3:171-176(2002).
[16]
INTERACTION WITH GFER.
DOI=10.1096/fj.01-0506fje; PubMed=11709497 [NCBI, ExPASy, EBI, Israel, Japan]
Lu C., Li Y., Zhao Y., Xing G., Tang F., Wang Q., Sun Y., Wei H., Yang X., Wu C., Chen J., Guan K.-L., Zhang C., Chen H., He F.;
"Intracrine hepatopoietin potentiates AP-1 activity through JAB1 independent of MAPK pathway.";
FASEB J. 16:90-92(2002).
[17]
INTERACTION WITH UCHL1.
DOI=10.1038/sj.onc.1205390; PubMed=12082530 [NCBI, ExPASy, EBI, Israel, Japan]
Caballero O.L., Resto V., Patturajan M., Meerzaman D., Guo M.Z., Engles J., Yochem R., Ratovitski E., Sidransky D., Jen J.;
"Interaction and colocalization of PGP9.5 with JAB1 and p27(Kip1).";
Oncogene 21:3003-3010(2002).
[18]
FUNCTION.
DOI=10.1016/S0092-8674(03)00316-7; PubMed=12732143 [NCBI, ExPASy, EBI, Israel, Japan]
Groisman R., Polanowska J., Kuraoka I., Sawada J., Saijo M., Drapkin R., Kisselev A.F., Tanaka K., Nakatani Y.;
"The ubiquitin ligase activity in the DDB2 and CSA complexes is differentially regulated by the COP9 signalosome in response to DNA damage.";
Cell 113:357-367(2003).
[19]
FUNCTION.
DOI=10.1093/emboj/cdg127; PubMed=12628923 [NCBI, ExPASy, EBI, Israel, Japan]
Uhle S., Medalia O., Waldron R., Dumdey R., Henklein P., Bech-Otschir D., Huang X., Berse M., Sperling J., Schade R., Dubiel W.;
"Protein kinase CK2 and protein kinase D are associated with the COP9 signalosome.";
EMBO J. 22:1302-1312(2003).
[20]
IDENTIFICATION IN A COMPLEX WITH RAN; RANBP9 AND DYRK1B.
DOI=10.1074/jbc.M307556200; PubMed=14500717 [NCBI, ExPASy, EBI, Israel, Japan]
Zou Y., Lim S., Lee K., Deng X., Friedman E.;
"Serine/threonine kinase Mirk/Dyrk1B is an inhibitor of epithelial cell migration and is negatively regulated by the Met adaptor Ran-binding protein M.";
J. Biol. Chem. 278:49573-49581(2003).
[21]
INTERACTION WITH TOP2A.
DOI=10.1074/jbc.M401411200; PubMed=15126503 [NCBI, ExPASy, EBI, Israel, Japan]
Yun J., Tomida A., Andoh T., Tsuruo T.;
"Interaction between glucose-regulated destruction domain of DNA topoisomerase IIalpha and MPN domain of Jab1/CSN5.";
J. Biol. Chem. 279:31296-31303(2004).
[22]
INTERACTION WITH SMAD7.
DOI=10.1128/MCB.24.6.2251-2262.2004; PubMed=14993265 [NCBI, ExPASy, EBI, Israel, Japan]
Kim B.-C., Lee H.-J., Park S.H., Lee S.R., Karpova T.S., McNally J.G., Felici A., Lee D.K., Kim S.-J.;
"Jab1/CSN5, a component of the COP9 signalosome, regulates transforming growth factor beta signaling by binding to Smad7 and promoting its degradation.";
Mol. Cell. Biol. 24:2251-2262(2004).
Comments
  • FUNCTION: Probable protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1 and ICSBP, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively. In the complex, it probably acts as the catalytic center that mediates the cleavage of Nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex. Interacts direclty with a large number of proteins that are regulated by the CSN complex, confirming a key role in the complex.
  • COFACTOR: Divalent metal ions (By similarity).
  • SUBUNIT: Component of the CSN complex, composed of COPS1/GPS1, COPS2, COPS3, COPS4, COPS5, COP6, COPS7 (COPS7A or COPS7B) and COPS8. In the complex, it probably interacts directly with COPS1, COPS2, COPS4, COPS6 and COPS7 (COPS7A or COPS7B). Also exists as monomeric form. Interacts with TP53, MIF, JUN, UCHL1, NCOA1, HIF1A, CDKN1B, BCL3, GFER, PGR, LHCGR, SMAD4, SMAD7, ID1, ID3, ITGB2 and TOP2A. Part of a complex consisting of RANBP9, Ran, DYRK1B and COPS5.
  • INTERACTION:
    O95273:CCNDBP1; NbExp=1; IntAct=EBI-594661, EBI-748961;
    P46527:CDKN1B; NbExp=1; IntAct=EBI-594661, EBI-519280;
    P10599:TXN; NbExp=5; IntAct=EBI-594661, EBI-594644;
    P09936:UCHL1; NbExp=1; IntAct=EBI-594661, EBI-714860;
    P40337:VHL; NbExp=1; IntAct=EBI-594661, EBI-301246;
  • SUBCELLULAR LOCATION: Cytoplasm. Nucleus.
  • DOMAIN: The JAMM motif is essential for the protease activity of the CSN complex resulting in deneddylation of cullins. It may constitute the catalytic center of the complex (By similarity).
  • SIMILARITY: Belongs to the peptidase M67A family. CSN5 subfamily [view classification].
  • SIMILARITY: Contains 1 MPN (JAB/Mov34) domain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U65928; AAB16847.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U70734; AAD03468.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CR541678; CAG46479.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC001187; AAH01187.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC001859; AAH01859.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC007272; AAH07272.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BX648542; CAH10375.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY078082; AAL82571.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S71820; S71820.
RefSeq NP_006828.2; -.
UniGene Hs.491912
3D structure databases
ModBase Q92905.
Protein-protein interaction databases
IntAct Q92905; -.
Protein family/group databases
MEROPS M67.002; -.
PTM databases
PhosphoSite Q92905; -.
2D gel databases
REPRODUCTION-2DPAGE IPI00009958; -.
Organism-specific databases
H-InvDB HIX0007560; -.
HGNC HGNC:2240; COPS5.
GenAtlas COPS5.
HPA CAB004242; -.
HPA004845; -.
MIM 604850; gene. [NCBI / EBI]
PharmGKB PA26757; -.
GeneCards Q92905.
Gene expression databases
ArrayExpress Q92905; -.
CleanEx HS_COPS5; -.
GermOnline ENSG00000121022; Homo sapiens.
Ontologies
GO
GO:0005852; Cellular component: eukaryotic translation initiation factor 3 complex (traceable author statement from ProtInc).
GO:0003713; Molecular function: transcription coactivator activity (traceable author statement from ProtInc).
GO:0003743; Molecular function: translation initiation factor activity (traceable author statement from ProtInc).
GO:0006366; Biological process: transcription from RNA polymerase II promoter (traceable author statement from ProtInc).
GO:0006412; Biological process: translation (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR000555; Mov34_MPN_PAD1.
Graphical view of domain structure.
Pfam PF01398; Mov34; 1.
Pfam graphical view of domain structure.
ProDom PD363422; Mov34-1; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00232; JAB_MPN; 1.
SMART graphical view of domain structure.
BLOCKS Q92905.
Genome annotation databases
Ensembl ENSG00000121022; Homo sapiens. [Contig view]
GeneID 10987; -.
KEGG hsa:10987; -.
Phylogenomic databases
HOGENOM Q92905; -.
HOVERGEN Q92905; -.
Other
LinkHub Q92905; -.
SOURCE COPS5; Homo sapiens.
ProtoNet Q92905.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Acetylation; Cytoplasm; Direct protein sequencing; Hydrolase; Metal-binding; Metalloprotease; Nucleus; Protease; Signalosome.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   334  333     COP9 signalosome complex subunit 5. PRO_0000194835
DOMAIN   53   164  112     MPN. 
MOTIF   138   151  14     JAMM motif. 
MOD_RES   2     2        N-acetylalanine. 
CONFLICT   43    45        KPW -> NLG (in Ref. 2; AAD03468). 
CONFLICT   129   129        R -> H (in Ref. 1; AAB16847). 
Sequence information
Length: 334 AA [This is the length of the unprocessed precursor] Molecular weight: 37579 Da [This is the MW of the unprocessed precursor] CRC64: B5742F4AAD03A1CF [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAASGSGMAQ KTWELANNMQ EAQSIDEIYK YDKKQQQEIL AAKPWTKDHH YFKYCKISAL 

        70         80         90        100        110        120 
ALLKMVMHAR SGGNLEVMGL MLGKVDGETM IIMDSFALPV EGTETRVNAQ AAAYEYMAAY 

       130        140        150        160        170        180 
IENAKQVGRL ENAIGWYHSH PGYGCWLSGI DVSTQMLNQQ FQEPFVAVVI DPTRTISAGK 

       190        200        210        220        230        240 
VNLGAFRTYP KGYKPPDEGP SEYQTIPLNK IEDFGVHCKQ YYALEVSYFK SSLDRKLLEL 

       250        260        270        280        290        300 
LWNKYWVNTL SSSSLLTNAD YTTGQVFDLS EKLEQSEAQL GRGSFMLGLE THDRKSEDKL 

       310        320        330 
AKATRDSCKT TIEAIHGLMS QVIKDKLFNQ INIS 

Q92905 in FASTA format

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