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UniProtKB/Swiss-Prot entry Q92834


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RPGR_HUMAN
Primary accession number Q92834
Secondary accession numbers O00702 O00737 Q8N5T6 Q93039 Q9HD29 Q9UMR1
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on September 19, 2002 (Sequence version 2)
Annotations were last modified on    June 16, 2009 (Entry version 99)
Name and origin of the protein
Protein name X-linked retinitis pigmentosa GTPase regulator
Synonyms None
Gene name
Name: RPGR
Synonyms: RP3, XLRP3
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 2 AND 4), AND VARIANTS RP3 GLN-98; VAL-215; ARG-250 AND 296-THR--ILE-300 DEL.
DOI=10.1038/ng0596-35; PubMed=8673101 [NCBI, ExPASy, EBI, Israel, Japan]
Meindl A., Dry K.L., Herrmann K., Manson F.D., Ciccodicola A., Edgar A.J., Carvalho M.R.S., Achatz H., Hellebrand H., Lennon A.A., Migliaccio C., Porter K., Zrenner E., Bird A.C., Jay M., Lorenz B., Wittwer B., D'Urso M., Meitinger T., Wright A.F.;
"A gene (RPGR) with homology to the RCC1 guanine nucleotide exchange factor is mutated in X-linked retinitis pigmentosa (RP3).";
Nat. Genet. 13:35-42(1996).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), AND VARIANTS RP3 CYS-130; SER-235 AND SER-275.
TISSUE=Retina;
DOI=10.1093/hmg/5.7.1035; PubMed=8817343 [NCBI, ExPASy, EBI, Israel, Japan]
Roepman R., van Duijnhoven G., Rosenberg T., Pinckers A.J.L.G., Bleeker-Wagemakers L.M., Bergen A.A.B., Post J., Beck A., Reinhardt R., Ropers H.-H., Cremers F., Berger W.;
"Positional cloning of the gene for X-linked retinitis pigmentosa 3: homology with the guanine-nucleotide-exchange factor RCC1.";
Hum. Mol. Genet. 5:1035-1041(1996).
[3]
SEQUENCE REVISION.
Berger W.;
Submitted (AUG-1996) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 2 AND 3).
TISSUE=Retina;
DOI=10.1093/hmg/8.8.1571; PubMed=10401007 [NCBI, ExPASy, EBI, Israel, Japan]
Kirschner R., Rosenberg T., Schultz-Heienbrok R., Lenzner S., Feil S., Roepman R., Cremers F.P.M., Ropers H.-H., Berger W.;
"RPGR transcription studies in mouse and human tissues reveal a retina-specific isoform that is disrupted in a patient with X-linked retinitis pigmentosa.";
Hum. Mol. Genet. 8:1571-1578(1999).
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 2).
DOI=10.1007/s004390100572; PubMed=11702207 [NCBI, ExPASy, EBI, Israel, Japan]
Kirschner R., Erturk D., Zeitz C., Sahin S., Ramser J., Cremers F.P.M., Ropers H.-H., Berger W.;
"DNA sequence comparison of human and mouse retinitis pigmentosa GTPase regulator (RPGR) identifies tissue-specific exons and putative regulatory elements.";
Hum. Genet. 109:271-278(2001).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5).
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 525-840 (ISOFORM 1), AND VARIANTS RP3 GLN-98 AND ARG-250.
DOI=10.1038/78182; PubMed=10932196 [NCBI, ExPASy, EBI, Israel, Japan]
Vervoort R., Lennon A.A., Bird A.C., Tulloch B., Axton R., Miano M.G., Meindl A., Meitinger T., Ciccodicola A., Wright A.F.;
"Mutational hot spot within a new RPGR exon in X-linked retinitis pigmentosa.";
Nat. Genet. 25:462-466(2000).
[8]
INTERACTION WITH RPGRIP1.
DOI=10.1093/hmg/9.14.2095; PubMed=10958648 [NCBI, ExPASy, EBI, Israel, Japan]
Roepman R., Bernoud-Hubac N., Schick D.E., Maugeri A., Berger W., Ropers H.-H., Cremers F.P.M., Ferreira P.A.;
"The retinitis pigmentosa GTPase regulator (RPGR) interacts with novel transport-like proteins in the outer segments of rod photoreceptors.";
Hum. Mol. Genet. 9:2095-2105(2000).
[9]
TISSUE SPECIFICITY.
DOI=10.1093/hmg/11.16.1899; PubMed=12140192 [NCBI, ExPASy, EBI, Israel, Japan]
Mavlyutov T.A., Zhao H., Ferreira P.A.;
"Species-specific subcellular localization of RPGR and RPGRIP isoforms: implications for the phenotypic variability of congenital retinopathies among species.";
Hum. Mol. Genet. 11:1899-1907(2002).
[10]
VARIANTS RP3 VAL-60; VAL-75 AND GLY-262, AND VARIANTS LYS-425; VAL-431 AND GLU-566.
DOI=10.1086/301646; PubMed=9399904 [NCBI, ExPASy, EBI, Israel, Japan]
Buraczynska M., Wu W., Fujita R., Buraczynska K., Phelps E., Andreasson S., Bennett J., Birch D.G., Fishman G.A., Hoffman D.R., Inana G., Jacobson S.G., Musarella M.A., Sieving P.A., Swaroop A.;
"Spectrum of mutations in the RPGR gene that are identified in 20% of families with X-linked retinitis pigmentosa.";
Am. J. Hum. Genet. 61:1287-1292(1997).
[11]
VARIANT RP3 VAL-60.
DOI=10.1016/S0161-6420(98)91231-3; PubMed=9855162 [NCBI, ExPASy, EBI, Israel, Japan]
Fishman G.A., Grover S., Jacobson S.G., Alexander K.R., Derlacki D.J., Wu W., Buraczynska M., Swaroop A.;
"X-linked retinitis pigmentosa in two families with a missense mutation in the RPGR gene and putative change of glycine to valine at codon 60.";
Ophthalmology 105:2286-2296(1998).
[12]
VARIANTS RP3 ASN-99 AND VAL-289.
DOI=10.1038/sj.ejhg.5200352; PubMed=10482958 [NCBI, ExPASy, EBI, Israel, Japan]
Miano M.G., Testa F., Strazzullo M., Trujillo M., De Bernardo C., Grammatico B., Simonelli F., Mangino M., Torrente I., Ruberto G., Beneyto M., Antinolo G., Rinaldi E., Danesino C., Ventruto V., D'Urso M., Ayuso C., Baiget M., Ciccodicola A.;
"Mutation analysis of the RPGR gene reveals novel mutations in south European patients with X-linked retinitis pigmentosa.";
Eur. J. Hum. Genet. 7:687-694(1999).
[13]
VARIANTS ILE-76; LYS-425 AND GLU-566.
DOI=10.1007/s004390051064; PubMed=10480356 [NCBI, ExPASy, EBI, Israel, Japan]
Zito I., Thiselton D.L., Gorin M.B., Stout J.T., Plant C., Bird A.C., Bhattacharya S.S., Hardcastle A.J.;
"Identification of novel RPGR (retinitis pigmentosa GTPase regulator) mutations in a subset of X-linked retinitis pigmentosa families segregating with the RP3 locus.";
Hum. Genet. 105:57-62(1999).
[14]
INVOLVEMENT IN RP15.
DOI=10.1086/303091; PubMed=10970770 [NCBI, ExPASy, EBI, Israel, Japan]
Mears A.J., Hiriyanna S., Vervoort R., Yashar B., Gieser L., Fahrner S., Daiger S.P., Heckenlively J.R., Sieving P.A., Wright A.F., Swaroop A.;
"Remapping of the RP15 locus for X-linked cone-rod degeneration to Xp11.4-p21.1, and identification of a de novo insertion in the RPGR exon ORF15.";
Am. J. Hum. Genet. 67:1000-1003(2000).
[15]
VARIANT RP3 ARG-302.
DOI=10.1002/(SICI)1098-1004(200004)15:4<386::AID-HUMU23>3.0.CO;2-4; PubMed=10737996 [NCBI, ExPASy, EBI, Israel, Japan]
Zito I., Gorin M.B., Plant C., Bird A.C., Bhattacharya S.S., Hardcastle A.J.;
"Novel mutations of the RPGR gene in RP3 families.";
Hum. Mutat. 15:386-386(2000).
[16]
VARIANTS LYS-425; GLN-526 DEL; MET-533 AND GLU-566.
DOI=10.1002/1098-1004(200009)16:3<273::AID-HUMU19>3.0.CO;2-W; PubMed=10980543 [NCBI, ExPASy, EBI, Israel, Japan]
Zito I., Morris A., Tyson P., Winship I., Sharp D., Gilbert D., Thiselton D.L., Bhattacharya S.S., Hardcastle A.J.;
"Sequence variation within the RPGR gene: evidence for a founder complex allele.";
Hum. Mutat. 16:273-274(2000).
[17]
VARIANTS RP3 ARG-43; GLU-43; VAL-60; GLY-127; TYR-302 AND ASP-436, AND VARIANTS ASP-345; LYS-425; VAL-431 AND GLU-566.
PubMed=10937588 [NCBI, ExPASy, EBI, Israel, Japan]
Sharon D., Bruns G.A.P., McGee T.L., Sandberg M.A., Berson E.L., Dryja T.P.;
"X-linked retinitis pigmentosa: mutation spectrum of the RPGR and RP2 genes and correlation with visual function.";
Invest. Ophthalmol. Vis. Sci. 41:2712-2721(2000).
[18]
VARIANT RP3 ASP-436.
DOI=10.1002/1098-1004(200102)17:2<151::AID-HUMU7>3.3.CO;2-N; PubMed=11180598 [NCBI, ExPASy, EBI, Israel, Japan]
Guevara-Fujita M., Fahrner S., Buraczynska K., Cook J., Wheaton D., Cortes F., Vicencio C., Pena M., Fishman G.A., Mintz-Hittner H., Birch D.G., Hoffman D.R., Mears A.J., Fujita R., Swaroop A.;
"Five novel RPGR mutations in families with X-linked retinitis pigmentosa.";
Hum. Mutat. 17:151-151(2001).
[19]
INVOLVEMENT IN CORDX1, AND VARIANT ASP-345.
DOI=10.1086/339620; PubMed=11857109 [NCBI, ExPASy, EBI, Israel, Japan]
Demirci F.Y.K., Rigatti B.W., Wen G., Radak A.L., Mah T.S., Baic C.L., Traboulsi E.I., Alitalo T., Ramser J., Gorin M.B.;
"X-linked cone-rod dystrophy (locus COD1): identification of mutations in RPGR exon ORF15.";
Am. J. Hum. Genet. 70:1049-1053(2002).
[20]
VARIANTS RP3 GLY-127; ARG-173; TYR-250; LEU-258 DEL; ARG-267; GLY-285 AND ASP-436.
DOI=10.1086/340848; PubMed=11992260 [NCBI, ExPASy, EBI, Israel, Japan]
Breuer D.K., Yashar B.M., Filippova E., Hiriyanna S., Lyons R.H., Mears A.J., Asaye B., Acar C., Vervoort R., Wright A.F., Musarella M.A., Wheeler P., MacDonald I., Iannaccone A., Birch D., Hoffman D.R., Fishman G.A., Heckenlively J.R., Jacobson S.G., Sieving P.A., Swaroop A.;
"A comprehensive mutation analysis of RP2 and RPGR in a North American cohort of families with X-linked retinitis pigmentosa.";
Am. J. Hum. Genet. 70:1545-1554(2002).
[21]
VARIANTS RP3 ASN-312; TYR-312 AND ARG-320.
DOI=10.1086/379379; PubMed=14564670 [NCBI, ExPASy, EBI, Israel, Japan]
Sharon D., Sandberg M.A., Rabe V.W., Stillberger M., Dryja T.P., Berson E.L.;
"RP2 and RPGR mutations and clinical correlations in patients with X-linked retinitis pigmentosa.";
Am. J. Hum. Genet. 73:1131-1146(2003).
[22]
VARIANTS RP3 LEU-152 AND VAL-215.
DOI=10.1167/iovs.02-0605; PubMed=12657579 [NCBI, ExPASy, EBI, Israel, Japan]
Bader I., Brandau O., Achatz H., Apfelstedt-Sylla E., Hergersberg M., Lorenz B., Wissinger B., Wittwer B., Rudolph G., Meindl A., Meitinger T.;
"X-linked retinitis pigmentosa: RPGR mutations in most families with definite X linkage and clustering of mutations in a short sequence stretch of exon ORF15.";
Invest. Ophthalmol. Vis. Sci. 44:1458-1463(2003).
[23]
INVOLVEMENT IN RPDSI.
DOI=10.1136/jmg.40.8.609; PubMed=12920075 [NCBI, ExPASy, EBI, Israel, Japan]
Zito I., Downes S.M., Patel R.J., Cheetham M.E., Ebenezer N.D., Jenkins S.A., Bhattacharya S.S., Webster A.R., Holder G.E., Bird A.C., Bamiou D.E., Hardcastle A.J.;
"RPGR mutation associated with retinitis pigmentosa, impaired hearing, and sinorespiratory infections.";
J. Med. Genet. 40:609-615(2003).
[24]
VARIANT RPDSI ARG-173.
DOI=10.1136/jmg.40.11.e118; PubMed=14627685 [NCBI, ExPASy, EBI, Israel, Japan]
Iannaccone A., Breuer D.K., Wang X.F., Kuo S.F., Normando E.M., Filippova E., Baldi A., Hiriyanna S., MacDonald C.B., Baldi F., Cosgrove D., Morton C.C., Swaroop A., Jablonski M.M.;
"Clinical and immunohistochemical evidence for an X linked retinitis pigmentosa syndrome with recurrent infections and hearing loss in association with an RPGR mutation.";
J. Med. Genet. 40:E118-E118(2003).
Comments
  • FUNCTION: Could be a guanine-nucleotide releasing factor.
  • SUBUNIT: Interacts with RPGRIP1.
  • SUBCELLULAR LOCATION: Golgi apparatus (By similarity).
  • ALTERNATIVE PRODUCTS: 5 named isoforms [FASTA] produced by alternative splicing. Additional isoforms seem to exist.
    Name1
    Isoform IDQ92834-1
    This is the isoform sequence displayed in this entry.
    Name2
    Isoform IDQ92834-2
    Features which should be applied to build the isoform sequence: VSP_005548.
    Name3
    Isoform IDQ92834-3
    Features which should be applied to build the isoform sequence: VSP_005548, VSP_005549, VSP_005550.
    Name4
    Isoform IDQ92834-4
    Features which should be applied to build the isoform sequence: VSP_005547, VSP_005548.
    Name5
    Isoform IDQ92834-5
    Note: No experimental confirmation available.
    Features which should be applied to build the isoform sequence: VSP_009183, VSP_009184.
  • TISSUE SPECIFICITY: Heart, brain, placenta, lung, liver, muscle, kidney, retina, pancreas and fetal retinal pigment epithelium. Isoform 3 is found only in the retina. Colocalizes with RPGRIP1 in the outer segment of rod photoreceptors and cone outer segments.
  • PTM: Prenylated (By similarity).
  • DISEASE: Defects in RPGR are the cause of retinitis pigmentosa type 3 (RP3) [MIM:300389]; also known as X-linked retinitis pigmentosa 3 (XLRP-3). RP leads to degeneration of retinal photoreceptor cells. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. RP3 is a form of choroidoretinal degeneration which is distinguished from other types by the presence in heterozygous women, with no visual defects, of a brilliant, scintillating, golden-hued, patchy appearance most striking around the macula, called a tapetal-like retinal reflex.
  • DISEASE: Defects in RPGR are the cause of retinitis pigmentosa type 15 (RP15) [MIM:300029]. RP15 belongs to the X-linked forms of retinitis pigmentosa (XLRP) which are among the most severe, because of their early onset, often leading to significant vision loss before the 4th decade.
  • DISEASE: Defects in RPGR are the cause of X-linked retinitis pigmentosa with deafness and sinorespiratory infections (RPDSI) [MIM:300455]. The phenotype has similarities with primary ciliary dyskinesia and Usher syndrome.
  • DISEASE: Defects in RPGR are the cause of cone-rod dystrophy X-linked type 1 (CORDX1) [MIM:304020]; also known as cone dystrophy 1 (CO1). CORDs are inherited retinal dystrophies belonging to the group of pigmentary retinopathies. CORDs are characterized by retinal pigment deposits visible on fundus examination, predominantly in the macular region, and initial loss of cone photoreceptors followed by rod degeneration. This leads to decreased visual acuity and sensitivity in the central visual field, followed by loss of peripheral vision. Severe loss of vision occurs earlier than in retinitis pigmentosa. In CORDX1 the degree of rod-photoreceptor involvement can be variable, with degeneration increasing as the disease progresses. Affected individuals (essentially all of whom are males) present with decreased visual acuity, myopia, photophobia, abnormal color vision, full peripheral visual fields, decreased photopic electroretinographic responses, and granularity of the macular retinal pigment epithelium. Although penetrance appears to be nearly 100%, there is variable expressivity with respect to age at onset and severity of symptoms.
  • SIMILARITY: Contains 6 RCC1 repeats.
  • WEB RESOURCE: Name=Mutations of the RPGR gene; Note=Retina International's Scientific Newsletter; URL="http://www.retina-international.com/sci-news/rpgrmut.htm";.
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=RPGR";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U57629; AAC50481.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X97668; CAA66258.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ238395; CAB54002.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AJ318463; CAC86116.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC031624; AAH31624.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF286471; AAG00550.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00023757; -.
IPI00215806; -.
IPI00215807; -.
IPI00215808; -.
IPI00397031; -.
RefSeq NP_000319.1; -.
UniGene Hs.61438
3D structure databases
HSSP P18754; 1I2M. [HSSP ENTRY / PDB]
ModBase Q92834.
Organism-specific databases
GeneCards GC0XM038013; -.
H-InvDB HIX0016727; -.
HGNC HGNC:10295; RPGR.
GenAtlas RPGR.
HPA HPA001593; -.
MIM 300029; phenotype. [NCBI / EBI]
300389; phenotype. [NCBI / EBI]
300455; phenotype. [NCBI / EBI]
304020; phenotype. [NCBI / EBI]
312610; gene. [NCBI / EBI]
Orphanet 49382; Achromatopsia.
1872; Cone rod dystrophy.
244; Primary ciliary dyskinesia.
791; Retinitis pigmentosa.
PharmGKB PA34656; -.
Gene expression databases
ArrayExpress Q92834; -.
Bgee Q92834; -.
CleanEx HS_RPGR; -.
GermOnline ENSG00000156313; Homo sapiens.
Ontologies
GO
GO:0005794; Cellular component: Golgi apparatus (inferred from sequence or structural similarity from UniProtKB).
GO:0005739; Cellular component: mitochondrion (inferred from direct assay from HPA).
GO:0005085; Molecular function: guanyl-nucleotide exchange factor activity (inferred from electronic annotation from UniProtKB-KW).
GO:0005515; Molecular function: protein binding (traceable author statement from ProtInc).
GO:0006886; Biological process: intracellular protein transport (traceable author statement from ProtInc).
GO:0050896; Biological process: response to stimulus (inferred from electronic annotation from UniProtKB-KW).
GO:0007605; Biological process: sensory perception of sound (inferred from electronic annotation from UniProtKB-KW).
GO:0007601; Biological process: visual perception (inferred from mutant phenotype from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR000408; Reg_chr_condens.
IPR009091; Reg_csome_cond/b-lactamase_inh.
Graphical view of domain structure.
Gene3D G3DSA:2.130.10.30; Reg_csome_cond/b-lactamase_inh; 1.
Pfam PF00415; RCC1; 4.
Pfam graphical view of domain structure.
PRINTS PR00633; RCCNDNSATION.
PROSITE PS00625; RCC1_1; FALSE_NEG.
PS00626; RCC1_2; 4.
PS50012; RCC1_3; 6.
PROSITE graphical view of domain structure (profiles).
Proteomic databases
PRIDE Q92834; -.
Genome annotation databases
Ensembl ENSG00000156313; Homo sapiens. [Contig view]
GeneID 6103; -.
KEGG hsa:6103; -.
Phylogenomic databases
HOVERGEN Q92834; -.
OMA Q92834; NNNEPLP.
Other
NextBio 23741; -.
SOURCE RPGR; Homo sapiens.
ProtoNet Q92834.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Cone-rod dystrophy; Deafness; Disease mutation; Golgi apparatus; Guanine-nucleotide releasing factor; Lipoprotein; Methylation; Polymorphism; Prenylation; Repeat; Retinitis pigmentosa; Sensory transduction; Vision.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
CHAIN   1   1017  1017     X-linked retinitis pigmentosa GTPase regulator. PRO_0000206638
PROPEP   1018   1020  3     Removed in mature form (Potential). PRO_0000370844
REPEAT   54    105  52     RCC1 1. 
REPEAT   106    158  53     RCC1 2. 
REPEAT   159    208  50     RCC1 3. 
REPEAT   209    261  53     RCC1 4. 
REPEAT   262    313  52     RCC1 5. 
REPEAT   314    367  54     RCC1 6. 
COMPBIAS   530    903  374     Glu-rich. 
MOD_RES   1017   1017        Cysteine methyl ester (Potential). 
LIPID   1017   1017        S-geranylgeranyl cysteine (Potential). 
VAR_SEQ   354    415        Missing (in isoform 4). VSP_005547
VAR_SEQ   473    480        YLLDEMTK -> THHEPEFQ (in isoform 5). VSP_009183
VAR_SEQ   481   1020        Missing (in isoform 5). VSP_009184
VAR_SEQ   585    789        Missing (in isoform 2, isoform 3 and isoform 4). VSP_005548
VAR_SEQ   841    851        DHEFSKTEELK -> YSASHSQIVSV (in isoform 3). VSP_005549
VAR_SEQ   852   1020        Missing (in isoform 3). VSP_005550
VARIANT   43     43  1     G -> E (in RP3). VAR_018057 
VARIANT   43     43  1     G -> R (in RP3). VAR_018058 
VARIANT   60     60  1     G -> V (in RP3). VAR_008501 
VARIANT   75     75  1     I -> V (in RP3; could be a polymorphism). VAR_008503 
VARIANT   76     76  1     S -> I (in dbSNP:rs1801685 [NCBI]). VAR_013624 
VARIANT   98     98  1     H -> Q (in RP3). VAR_008504 
VARIANT   99     99  1     T -> N (in RP3). VAR_013625 
VARIANT   127    127  1     R -> G (in RP3). VAR_018059 
VARIANT   130    130  1     F -> C (in RP3). VAR_006850 
VARIANT   152    152  1     S -> L (in RP3). VAR_025949 
VARIANT   173    173  1     G -> R (in RP3 and RPDSI). VAR_018060 
VARIANT   184    184  1     Q -> H (in dbSNP:rs5963403 [NCBI]). VAR_033259 
VARIANT   215    215  1     G -> V (in RP3). VAR_008505 
VARIANT   235    235  1     P -> S (in RP3). VAR_006851 
VARIANT   250    250  1     C -> R (in RP3). VAR_008506 
VARIANT   250    250  1     C -> Y (in RP3). VAR_018061 
VARIANT   258    258  1     Missing (in RP3). VAR_018062
VARIANT   262    262  1     A -> G (in RP3; could be a polymorphism). VAR_008507 
VARIANT   267    267  1     G -> E (in RP3). VAR_018063 
VARIANT   267    267  1     G -> R (in RP3). VAR_026127 
VARIANT   275    275  1     G -> S (in RP3). VAR_006852 
VARIANT   285    285  1     E -> G (in RP3). VAR_026128 
VARIANT   289    289  1     I -> V (in RP3). VAR_013626 
VARIANT   296    300  5     Missing (in RP3). VAR_013627
VARIANT   302    302  1     C -> R (in RP3). VAR_011561 
VARIANT   302    302  1     C -> Y (in RP3). VAR_018064 
VARIANT   312    312  1     D -> N (in RP3). VAR_018065 
VARIANT   312    312  1     D -> Y (in RP3). VAR_018066 
VARIANT   320    320  1     G -> R (in RP3). VAR_018067 
VARIANT   345    345  1     N -> D (rare polymorphism; dbSNP:rs41305223 [NCBI]). VAR_018068 
VARIANT   425    425  1     R -> K (in dbSNP:rs1801687 [NCBI]). VAR_008508 
VARIANT   431    431  1     I -> V. VAR_008509 
VARIANT   436    436  1     G -> D (in RP3). VAR_008510 
VARIANT   526    526  1     Missing. VAR_011562
VARIANT   533    533  1     T -> M (in dbSNP:rs41312104 [NCBI]). VAR_011563 
VARIANT   566    566  1     G -> E (in dbSNP:rs1801688 [NCBI]). VAR_008511 
CONFLICT   1      3        MRE -> MAKLRRSTTTAL (in Ref. 4). 
CONFLICT   190    190        K -> N (in Ref. 4; CAC86116). 
Sequence information
Length: 1020 AA [This is the length of the unprocessed precursor] Molecular weight: 113387 Da [This is the MW of the unprocessed precursor] CRC64: EAB16275A9A436C3 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MREPEELMPD SGAVFTFGKS KFAENNPGKF WFKNDVPVHL SCGDEHSAVV TGNNKLYMFG 

        70         80         90        100        110        120 
SNNWGQLGLG SKSAISKPTC VKALKPEKVK LAACGRNHTL VSTEGGNVYA TGGNNEGQLG 

       130        140        150        160        170        180 
LGDTEERNTF HVISFFTSEH KIKQLSAGSN TSAALTEDGR LFMWGDNSEG QIGLKNVSNV 

       190        200        210        220        230        240 
CVPQQVTIGK PVSWISCGYY HSAFVTTDGE LYVFGEPENG KLGLPNQLLG NHRTPQLVSE 

       250        260        270        280        290        300 
IPEKVIQVAC GGEHTVVLTE NAVYTFGLGQ FGQLGLGTFL FETSEPKVIE NIRDQTISYI 

       310        320        330        340        350        360 
SCGENHTALI TDIGLMYTFG DGRHGKLGLG LENFTNHFIP TLCSNFLRFI VKLVACGGCH 

       370        380        390        400        410        420 
MVVFAAPHRG VAKEIEFDEI NDTCLSVATF LPYSSLTSGN VLQRTLSARM RRRERERSPD 

       430        440        450        460        470        480 
SFSMRRTLPP IEGTLGLSAC FLPNSVFPRC SERNLQESVL SEQDLMQPEE PDYLLDEMTK 

       490        500        510        520        530        540 
EAEIDNSSTV ESLGETTDIL NMTHIMSLNS NEKSLKLSPV QKQKKQQTIG ELTQDTALTE 

       550        560        570        580        590        600 
NDDSDEYEEM SEMKEGKACK QHVSQGIFMT QPATTIEAFS DEEVGNDTGQ VGPQADTDGE 

       610        620        630        640        650        660 
GLQKEVYRHE NNNGVDQLDA KEIEKESDGG HSQKESEAEE IDSEKETKLA EIAGMKDLRE 

       670        680        690        700        710        720 
REKSTKKMSP FFGNLPDRGM NTESEENKDF VKKRESCKQD VIFDSERESV EKPDSYMEGA 

       730        740        750        760        770        780 
SESQQGIADG FQQPEAIEFS SGEKEDDEVE TDQNIRYGRK LIEQGNEKET KPIISKSMAK 

       790        800        810        820        830        840 
YDFKCDRLSE IPEEKEGAED SKGNGIEEQE VEANEENVKV HGGRKEKTEI LSDDLTDKAE 

       850        860        870        880        890        900 
DHEFSKTEEL KLEDVDEEIN AENVESKKKT VGDDESVPTG YHSKTEGAER TNDDSSAETI 

       910        920        930        940        950        960 
EKKEKANLEE RAICEYNENP KGYMLDDADS SSLEILENSE TTPSKDMKKT KKIFLFKRVP 

       970        980        990       1000       1010       1020 
SINQKIVKNN NEPLPEIKSI GDQIILKSDN KDADQNHMSQ NHQNIPPTNT ERRSKSCTIL 

Q92834 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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