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UniProtKB/Swiss-Prot entry Q8YY71

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DDL_ANASP
Primary accession number Q8YY71
Secondary accession numbers None
Integrated into Swiss-Prot on August 2, 2002
Sequence was last modified on March 1, 2002 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 42)
Name and origin of the protein
Protein name D-alanine--D-alanine ligase
Synonyms EC 6.3.2.4
D-alanylalanine synthetase
D-Ala-D-Ala ligase
Gene name
Name: ddl
OrderedLocusNames: all0980
From
Anabaena sp. (strain PCC 7120) [TaxID: 103690] [HAMAP proteome]
Taxonomy Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1093/dnares/8.5.205; PubMed=11759840 [NCBI, ExPASy, EBI, Israel, Japan]
Kaneko T., Nakamura Y., Wolk C.P., Kuritz T., Sasamoto S., Watanabe A., Iriguchi M., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakazaki N., Shimpo S., Sugimoto M., Takazawa M., Yamada M., Yasuda M., Tabata S.;
"Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120.";
DNA Res. 8:205-213(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BA000019; BAB72937.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR AI1928; AI1928.
RefSeq NP_485023.1; -.
3D structure databases
HSSP P71454; 1EHI. [HSSP ENTRY / PDB]
ModBase Q8YY71.
Enzyme and pathway databases
BioCyc NSP103690:ALL0980-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0008716; Molecular function: D-alanine-D-alanine ligase activity (inferred from electronic annotation from HAMAP).
GO:0009252; Biological process: peptidoglycan biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00047; -; 1.
PBIL [Tree]
InterPro IPR011761; ATP-grasp.
IPR013816; ATP_grasp_subdomain_2.
IPR000291; D-Ala_lig_Van_CS.
IPR005905; D_ala_D_ala.
IPR011095; Dala_Dala_lig_C.
IPR011127; Dala_Dala_lig_N.
IPR013817; Pre-ATP_grasp.
Graphical view of domain structure.
Gene3D G3DSA:3.30.470.20; ATP_grasp_subdomain_2; 1.
G3DSA:3.40.50.20; Pre-ATP_grasp; 1.
Pfam PF07478; Dala_Dala_lig_C; 1.
PF01820; Dala_Dala_lig_N; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01205; D_ala_D_alaTIGR; 1.
PROSITE PS50975; ATP_GRASP; 1.
PS00843; DALA_DALA_LIGASE_1; 1.
PS00844; DALA_DALA_LIGASE_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q8YY71.
Genome annotation databases
GeneID 1104574; -.
GenomeReviews BA000019_GR; all0980.
KEGG ana:all0980; -.
NMPDR fig|103690.1.peg.1290; -.
Phylogenomic databases
HOGENOM Q8YY71; -.
Genome annotation databases
CMR Q8YY71; all0980.
Other
ProtoNet Q8YY71.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Cell shape; Cell wall biogenesis/degradation; Complete proteome; Cytoplasm; Ligase; Magnesium; Manganese; Metal-binding; Nucleotide-binding; Peptidoglycan synthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   364  364     D-alanine--D-alanine ligase. PRO_0000177779
DOMAIN   145   354  210     ATP-grasp. 
NP_BIND   181   236  56     ATP (By similarity). 
METAL   307   307        Magnesium or manganese 1 (By similarity). 
METAL   321   321        Magnesium or manganese 1 (By similarity). 
METAL   321   321        Magnesium or manganese 2 (By similarity). 
METAL   323   323        Magnesium or manganese 2 (By similarity). 
Sequence information
Length: 364 AA [This is the length of the unprocessed precursor] Molecular weight: 39427 Da [This is the MW of the unprocessed precursor] CRC64: 17E8ECC3BA36BF7F [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MRVGLLFGGR SGEHEVSISS ARAIASALSA GENASKYEIL PFYIHKDGRW LAGEAPQQVL 

        70         80         90        100        110        120 
KSGAPLLESS NSSPAENNLV NSQQQTLERW QSPSQVAEVD VWFPILHGPN GEDGTIQGLL 

       130        140        150        160        170        180 
TLMQTPFVGS GVLGSALGMD KIAMKMAFEQ AGLPQVKYKA VTRAQIWSNP CVFPKLCDEI 

       190        200        210        220        230        240 
EASLGYPCFV KPANLGSSVG ISKVRSRQEL EDALDNAANY DRRIIIEAGV AAREVECAVL 

       250        260        270        280        290        300 
GNDQPQASTV GEITFNSDFY DYETKYTAGK ADLLIPAIIP DDISRQIQNM ALQAFAAVDA 

       310        320        330        340        350        360 
AGLARVDFFY VEATGEVLIN EINTLPGFTA TSMYPQLWAH SGIPFPELVD KLVQLAIERH 


NPSH
Q8YY71 in FASTA format

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