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UniProtKB/Swiss-Prot entry Q8WSR7


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CTNB_DICDI
Primary accession number Q8WSR7
Secondary accession number Q54W80
Integrated into Swiss-Prot on April 8, 2008
Sequence was last modified on March 1, 2002 (Sequence version 1)
Annotations were last modified on    April 8, 2008 (Entry version 25)
Name and origin of the protein
Protein name Countin-2 [Precursor]
Synonyms None
Gene name
Name: ctnB
ORFNames: DDB_0214993
From
Dictyostelium discoideum (Slime mold) [TaxID: 44689] 
Taxonomy Eukaryota; Mycetozoa; Dictyosteliida; Dictyostelium.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, DEVELOPMENTAL STAGE, SUBCELLULAR LOCATION, AND KNOCKOUT.
DOI=10.1046/j.1440-169X.2001.00615.x; PubMed=11737154 [NCBI, ExPASy, EBI, Israel, Japan]
Okuwa T., Katayama T., Takano A., Kodaira K., Yasukawa H.;
"Two cell-counting factors regulate the aggregate size of the cellular slime mold Dictyostelium discoideum.";
Dev. Growth Differ. 43:735-744(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AX4;
DOI=10.1038/nature03481; PubMed=15875012 [NCBI, ExPASy, EBI, Israel, Japan]
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
"The genome of the social amoeba Dictyostelium discoideum.";
Nature 435:43-57(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB067573; BAB84187.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AAFI02000033; EAL67512.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq XP_641512.1; -.
3D structure databases
ModBase Q8WSR7.
Organism-specific databases
dictyBase DDB0214993; ctnB.
Family and domain databases
InterPro IPR008139; SaposinB.
Graphical view of domain structure.
SMART SM00741; SapB; 1.
SMART graphical view of domain structure.
PROSITE PS50015; SAP_B; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q8WSR7.
Genome annotation databases
GeneID 3392606; -.
KEGG ddi:DDB_0214993; -.
Other
ProtoNet Q8WSR7.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Glycoprotein; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    19  19     Potential. 
CHAIN   20   254  235     Countin-2. PRO_0000327909
DOMAIN   22   107  86     Saposin B-type. 
CARBOHYD   110   110        N-linked (GlcNAc...) (Potential). 
CARBOHYD   219   219        N-linked (GlcNAc...) (Potential). 
DISULFID   26   103        By similarity. 
DISULFID   29    97        By similarity. 
DISULFID   56    68        By similarity. 
Sequence information
Length: 254 AA [This is the length of the unprocessed precursor] Molecular weight: 26347 Da [This is the MW of the unprocessed precursor] CRC64: 359482BE25C6D3AF [This is a checksum on the sequence]
        10         20         30         40         50         60 
MMIKYITIAI LFIASLVKAD LQFSLCPTCV DFINNDMGDL EKIISGGIAT SCGAVCSLLP 

        70         80         90        100        110        120 
NNIEQGACNL LCDIVGIDEF LKVFNNIGED ADPVWICEEL TVCPKNQNSN ATVLTSDVSP 

       130        140        150        160        170        180 
ASGPHGTTFT IGVAYKVEST LGTGEVAVMV TDPTGSNGFG DAQLIVNTQP GQYSTSFSFA 

       190        200        210        220        230        240 
ATPSEDEQFP AGVYQVQLMI CEGSCGAKHS VTFNSVYANF TVTSGPSVTG QMTGTGSGSG 

       250 
SGSGSSSGAA YLRY 

Q8WSR7 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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