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UniProtKB/Swiss-Prot entry Q8UET6


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TRMFO_AGRT5
Primary accession number Q8UET6
Secondary accession numbers None
Integrated into Swiss-Prot on November 28, 2002
Sequence was last modified on November 28, 2002 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 48)
Name and origin of the protein
Protein name Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO
Synonyms EC 2.1.1.74
Folate-dependent tRNA (uracil-5-)-methyltransferase
Folate-dependent tRNA(M-5-U54)-methyltransferase
Gene name
Name: trmFO
Synonyms: gid
OrderedLocusNames: Atu1669
ORFNames: AGR_C_3069
From
Agrobacterium tumefaciens (strain C58 / ATCC 33970) [TaxID: 176299] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066804; PubMed=11743193 [NCBI, ExPASy, EBI, Israel, Japan]
Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W.;
"The genome of the natural genetic engineer Agrobacterium tumefaciens C58.";
Science 294:2317-2323(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066803; PubMed=11743194 [NCBI, ExPASy, EBI, Israel, Japan]
Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.";
Science 294:2323-2328(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE007869; AAK87440.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR AG2781; AG2781.
G97560; G97560.
RefSeq NP_354655.2; -.
3D structure databases
ModBase Q8UET6.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0050660; Molecular function: FAD binding (inferred from electronic annotation from HAMAP).
GO:0047151; Molecular function: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity (inferred from electronic annotation from EC).
GO:0009021; Molecular function: tRNA (uracil-5-)-methyltransferase activity (inferred from electronic annotation from HAMAP).
GO:0008033; Biological process: tRNA processing (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01037; -; 1.
PBIL [Tree]
InterPro IPR013027; FAD_pyr_nucl-diS_OxRdtase.
IPR004417; Gid.
IPR002218; GIDA.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
PANTHER PTHR11806; GIDA; 1.
Pfam PF01134; GIDA; 1.
Pfam graphical view of domain structure.
PRINTS PR00368; FADPNR.
ProDom PD003738; GIDA; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR00137; gid_trmFO; 1.
PROSITE PS01280; GIDA_1; FALSE_NEG.
PS01281; GIDA_2; 1.
ProtoNet Q8UET6.
Genome annotation databases
GeneID 1133707; -.
GenomeReviews AE007869_GR; Atu1669.
KEGG atc:AGR_C_3069; -.
atu:Atu1669; -.
Phylogenomic databases
HOGENOM Q8UET6; -.
Genome annotation databases
CMR Q8UET6; Atu1669.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; FAD; Flavoprotein; Methyltransferase; Transferase; tRNA processing.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
CHAIN   1   481  481     Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO. PRO_0000117225
NP_BIND   13    18  6     FAD (By similarity). 
Sequence information
Length: 481 AA [This is the length of the unprocessed precursor] Molecular weight: 51801 Da [This is the MW of the unprocessed precursor] CRC64: 96A3366044F91EA8 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MQDKTHSPIH VVGGGLAGSE AAWQIAESGV PVILHEMRGV RGTDAHKGDT LAELVCSNSF 

        70         80         90        100        110        120 
RSDDATANAV GVIHAEMRLA GSLIIACADK HQVPAGGALA VDRDGFSQAV TDMLENHPLV 

       130        140        150        160        170        180 
TVVREEVTGL PPKEWGSTVI ATGPLTSPDL AAAVQAETGE DALAFFDAIA PILHRDSINM 

       190        200        210        220        230        240 
DICWYQSRYD KVGPGGTGKD YINCPMDEEQ YNVFIDALIA GDTVGFKEWE GTPYFDGCLP 

       250        260        270        280        290        300 
IEIMAERGRQ TLRHGPMKPM GLTNAHNPTV KAYAVVQLRQ DNALGTLYNM VGFQTKLKYS 

       310        320        330        340        350        360 
VQADVFRMIP GLENAEFARL GGLHRNTYID SPILLDRSLR LKSRPDLRFA GQITGCEGYV 

       370        380        390        400        410        420 
ESASVGLLAG RFAAAERKGE APSLPPATTA LGSLLNHITG GHLSSDDEPG KRSFQPMNIN 

       430        440        450        460        470        480 
FGLFPELEPG SIVKPDGVKR FRGKDKTIMK RQLVAARALK DCAAWLGVER VATEQESDAT 


P 

Q8UET6 in FASTA format

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