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UniProtKB/Swiss-Prot entry Q8UD80


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HEM6_AGRT5
Primary accession number Q8UD80
Secondary accession numbers None
Integrated into Swiss-Prot on August 30, 2002
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 45)
Name and origin of the protein
Protein name Coproporphyrinogen 3 oxidase, aerobic
Synonyms EC 1.3.3.3
Coproporphyrinogen III oxidase, aerobic
Coproporphyrinogenase
Coprogen oxidase
Gene name
Name: hemF
OrderedLocusNames: Atu2247
ORFNames: AGR_C_4089
From
Agrobacterium tumefaciens (strain C58 / ATCC 33970) [TaxID: 176299] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066804; PubMed=11743193 [NCBI, ExPASy, EBI, Israel, Japan]
Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W.;
"The genome of the natural genetic engineer Agrobacterium tumefaciens C58.";
Science 294:2317-2323(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066803; PubMed=11743194 [NCBI, ExPASy, EBI, Israel, Japan]
Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.";
Science 294:2323-2328(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE007869; AAK87989.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR AF2852; AF2852.
D97629; D97629.
RefSeq NP_355204.1; -.
3D structure databases
ModBase Q8UD80.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004109; Molecular function: coproporphyrinogen oxidase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0006779; Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00333; -; 1.
PBIL [Tree]
InterPro IPR001260; Coprogen_oxidas.
Graphical view of domain structure.
Gene3D G3DSA:3.40.1500.10; Coprogen_oxidas; 1.
PANTHER PTHR10755; Coprogen_oxidas; 1.
Pfam PF01218; Coprogen_oxidas; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000166; Coproporphyri_ox; 1.
PRINTS PR00073; COPRGNOXDASE.
PROSITE PS01021; COPROGEN_OXIDASE; 1.
ProtoNet Q8UD80.
Genome annotation databases
GeneID 1134285; -.
GenomeReviews AE007869_GR; Atu2247.
KEGG atc:AGR_C_4089; -.
atu:Atu2247; -.
Phylogenomic databases
HOGENOM Q8UD80; -.
Other
LinkHub Q8UD80; -.
Genome annotation databases
CMR Q8UD80; Atu2247.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Oxidoreductase; Porphyrin biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   303  303     Coproporphyrinogen 3 oxidase, aerobic. PRO_0000109879
Sequence information
Length: 303 AA [This is the length of the unprocessed precursor] Molecular weight: 34800 Da [This is the MW of the unprocessed precursor] CRC64: 198D14F7691BAE10 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MERPILPKGL PEDIEDKKAV AQAWFQHLRD TIVASFETLE DELTGPLSDQ EPGRFVQKDW 

        70         80         90        100        110        120 
LRDNGEGGGG KMSMMEGRVF EKVGVHTSTV YGEFSPEFRK QIPGAEEDPR FWASGLSLIA 

       130        140        150        160        170        180 
HPVNPNVPAV HMNTRMVVTT SHWFGGGADL TPVLGRRRTQ QDPDTQLFHR AFEITCNRHP 

       190        200        210        220        230        240 
IADYPRYKSW CDEYFFLKHR DEPRGTGGIF FDWLHPDEEK GGWDANFTFV QDVGRAFNLV 

       250        260        270        280        290        300 
YPKIVRANFN QNWTEEDRDE QLIRRGRYVE FNLLYDRGTI FGLKTGGNVE SILSSLPPVV 


RWP 

Q8UD80 in FASTA format

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