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UniProtKB/Swiss-Prot entry Q8UBZ7


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TRMD_AGRT5
Primary accession number Q8UBZ7
Secondary accession numbers None
Integrated into Swiss-Prot on December 6, 2002
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 40)
Name and origin of the protein
Protein name tRNA (guanine-N(1)-)-methyltransferase
Synonyms EC 2.1.1.31
M1G-methyltransferase
tRNA [GM37] methyltransferase
Gene name
Name: trmD
OrderedLocusNames: Atu2701
ORFNames: AGR_C_4898
From
Agrobacterium tumefaciens (strain C58 / ATCC 33970) [TaxID: 176299] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066804; PubMed=11743193 [NCBI, ExPASy, EBI, Israel, Japan]
Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W.;
"The genome of the natural genetic engineer Agrobacterium tumefaciens C58.";
Science 294:2317-2323(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066803; PubMed=11743194 [NCBI, ExPASy, EBI, Israel, Japan]
Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.";
Science 294:2323-2328(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE007869; AAK88421.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR AD2908; AD2908.
D97683; D97683.
RefSeq NP_355636.1; -.
3D structure databases
HSSP P43912; 1UAJ. [HSSP ENTRY / PDB]
ModBase Q8UBZ7.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0003723; Molecular function: RNA binding (inferred from electronic annotation from InterPro).
GO:0009019; Molecular function: tRNA (guanine-N1-)-methyltransferase activity (inferred from electronic annotation from HAMAP).
GO:0006400; Biological process: tRNA modification (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00605; -; 1.
PBIL [Tree]
InterPro IPR016009; tRNA_m1G_MeTrfase.
IPR002649; tRNA_m1G_MeTrfase_bac.
Graphical view of domain structure.
Pfam PF01746; tRNA_m1G_MT; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000386; tRNA_mtase; 1.
ProDom PD004978; tRNA_m1G_mtfrase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR00088; trmD; 1.
ProtoNet Q8UBZ7.
Genome annotation databases
GeneID 1134739; -.
GenomeReviews AE007869_GR; Atu2701.
KEGG atc:AGR_C_4898; -.
atu:Atu2701; -.
Phylogenomic databases
HOGENOM Q8UBZ7; -.
Genome annotation databases
CMR Q8UBZ7; Atu2701.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Methyltransferase; S-adenosyl-L-methionine; Transferase; tRNA processing.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   232  232     tRNA (guanine-N(1)-)-methyltransferase. PRO_0000060314
REGION   133   138  6     S-adenosyl-L-methionine binding (By similarity). 
BINDING   113   113        S-adenosyl-L-methionine; via amide nitrogen (By similarity). 
Sequence information
Length: 232 AA [This is the length of the unprocessed precursor] Molecular weight: 25340 Da [This is the MW of the unprocessed precursor] CRC64: 1E4DF99272DB33DA [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTFKATVLTL YPEMFPGHLQ YSLAGKALER GQWSLDPIQI REFATDRHRS VDDTPAGGGA 

        70         80         90        100        110        120 
GMVLKPDVLA AAIDHVSKGD TRPRLLMSPR GKPLSQNRVR ELAAGDGAII VCGRFEGVDQ 

       130        140        150        160        170        180 
RVIEARGLEE VSIGDYILSG GEPAALTLLD AVVRILPGVM GNDLSGVHES FEGGLLEHPH 

       190        200        210        220        230 
YTRPQLWEGR DIPAILTSGN HAAIDKWRHE QALALTKERR PDLLEKTQAE TK 

Q8UBZ7 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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