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UniProtKB/Swiss-Prot entry Q8U642


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DNE23_AGRT5
Primary accession number Q8U642
Secondary accession number Q7D2J1
Integrated into Swiss-Prot on July 19, 2005
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 36)
Name and origin of the protein
Protein name Error-prone DNA polymerase 3
Synonym EC 2.7.7.7
Gene name
Name: dnaE2-3
OrderedLocusNames: Atu6093
ORFNames: AGR_pTi_175
From
Agrobacterium tumefaciens (strain C58 / ATCC 33970) [TaxID: 176299] [HAMAP proteome]
Encoded on Plasmid pTiC58.
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066804; PubMed=11743193 [NCBI, ExPASy, EBI, Israel, Japan]
Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W.;
"The genome of the natural genetic engineer Agrobacterium tumefaciens C58.";
Science 294:2317-2323(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1066803; PubMed=11743194 [NCBI, ExPASy, EBI, Israel, Japan]
Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.";
Science 294:2323-2328(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE007871; AAK91053.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR AC3239; AC3239.
RefSeq NP_396612.1; -.
3D structure databases
ModBase Q8U642.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0003887; Molecular function: DNA-directed DNA polymerase activity (inferred from electronic annotation from HAMAP).
GO:0045020; Biological process: error-prone DNA repair (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01902; -; 1.
PBIL [Tree]
InterPro IPR011708; DNA_pol3_alpha.
IPR004365; NA_bd_OB_tRNA-helicase.
IPR004013; PHP_C.
IPR003141; PHP_N.
IPR004805; PolC_alpha.
Graphical view of domain structure.
Pfam PF07733; DNA_pol3_alpha; 1.
PF02811; PHP; 1.
PF01336; tRNA_anti; 1.
Pfam graphical view of domain structure.
SMART SM00481; POLIIIAc; 1.
SMART graphical view of domain structure.
TIGRFAMs TIGR00594; polc; 1.
BLOCKS Q8U642.
Genome annotation databases
GeneID 1137416; -.
GenomeReviews AE007871_GR; Atu6093.
KEGG atc:AGR_pTi_175; -.
atu:Atu6093; -.
Phylogenomic databases
HOGENOM Q8U642; -.
Genome annotation databases
CMR Q8U642; Atu6093.
Other
ProtoNet Q8U642.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; DNA damage; DNA repair; DNA replication; DNA-directed DNA polymerase; Nucleotidyltransferase; Plasmid; Transferase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   1087  1087     Error-prone DNA polymerase 3. PRO_0000103364
Sequence information
Length: 1087 AA [This is the length of the unprocessed precursor] Molecular weight: 122156 Da [This is the MW of the unprocessed precursor] CRC64: 66C81289A3841EC6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSYAELQVTT HFSFLRGASS AQELFETAKA LGIEALGVVD RNSLAGIVRA LEASRATGLR 

        70         80         90        100        110        120 
LVIGCRLDLA DGMSVLVYPT DRAAYSRLTR LITLGKSRGG KNNCLLHWDD VVAYTDGMIG 

       130        140        150        160        170        180 
ILVPDLPDDL CGIQLRKMAE LFGDRAYVSL CLRRRQNDQL RLHEISNLAT RFKVRTVVTN 

       190        200        210        220        230        240 
DVLFHEPGRR QLQDIVTCIR TRTTIDEVGF ERERHADRYL KPPEEMERLF PRYRQALART 

       250        260        270        280        290        300 
MEIVRRCTFS LEELTYQYPE EAIVPGKDAQ ASLEHYVWQC VPDRYPEGLP PDVLKVVRHE 

       310        320        330        340        350        360 
LDLIRTMKYA PYFLTVFSIV RYARSQGILC QGRGSAANSA VCYILGITSI DPSTNDLLFE 

       370        380        390        400        410        420 
RFVSQERDEP PDIDVDFEHE RREEVIQWIY RTYTREKAAL CATVTRYRAR GAIRDVGKAL 

       430        440        450        460        470        480 
GLPEDVIKAL SSGMWSWSEE VCDRNVRELN LNPDDRRLVL TLKLAQQLMG APRHLGQHPG 

       490        500        510        520        530        540 
GFVLTHDRLD DLVPIEPATM KDRQIIEWDK DDVEALKFMK VDILALGMLT CMAKAFDLIR 

       550        560        570        580        590        600 
EHKDRDLDLS KIEQEDSVTY AMIRKADTLG TFQIESRAQM AMLPRLKPRT FYDLVVQVAI 

       610        620        630        640        650        660 
VRPGPIQGDM VHPYLRRREG KEAVEYPTPE LEAVLGKTLG VPLFQESAMR VAMVCAGFTG 

       670        680        690        700        710        720 
GEADQLRKSM ATFKFTGGVS QFKDKLVSGM VRNGYAPEFA EKTFSQLEGF GSYGFPESHA 

       730        740        750        760        770        780 
ASFALIAYAS SYIKCHYPEA FCAALINSQP MGFYAPAQIV GDARAHGVEV RPVCINRSRW 

       790        800        810        820        830        840 
DCTLERIGNS DRHAVRLGFR QVKGLAVADA ARVVAARMNN AFVSVDDMWR RSGVPSEALV 

       850        860        870        880        890        900 
QLAKADAFLP SLKLERRDAL WAIKALRDEP LPLFAAAAER EMAAIAEQQE PGVALRQMTD 

       910        920        930        940        950        960 
GHNVIEDYSH TGLTLRQHPI AFLRKDLSVR NIITCAEAMN SRDGRWVYTA GLVLVRQKPG 

       970        980        990       1000       1010       1020 
SAKGVMFITI EDETGPANLV VWPTLFEKRR RAVLGSSMMA INGRIQREGE VVHLVAQQLF 

      1030       1040       1050       1060       1070       1080 
DLSGDLTGLA DRDEEFKLPA GRGDEFAHGS PGSSDTRDKS KPVVAPRDIF TPDLHIDTLK 


IKSRNFH 

Q8U642 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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