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UniProtKB/Swiss-Prot entry Q8TU00


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MTRD_METAC
Primary accession number Q8TU00
Secondary accession numbers None
Integrated into Swiss-Prot on November 28, 2003
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 43)
Name and origin of the protein
Protein name Tetrahydromethanopterin S-methyltransferase subunit D
Synonyms EC 2.1.1.86
N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit D
Gene name
Name: mtrD
OrderedLocusNames: MA_0275
From
Methanosarcina acetivorans [TaxID: 2214] [HAMAP proteome]
Taxonomy Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 35395 / DSM 2834 / JCM 12185 / C2A;
DOI=10.1101/gr.223902; PubMed=11932238 [NCBI, ExPASy, EBI, Israel, Japan]
Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P., McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A.M., Hedderich R., Ingram-Smith C., Kuettner H.C., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I.T., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B.;
"The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity.";
Genome Res. 12:532-542(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE010299; AAM03728.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_615248.1; -.
3D structure databases
ModBase Q8TU00.
Enzyme and pathway databases
BioCyc MACE188937:MA0275-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from InterPro).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from HAMAP).
GO:0012506; Cellular component: vesicle membrane (inferred from electronic annotation from InterPro).
GO:0030269; Molecular function: tetrahydromethanopterin S-methyltransferase activity (inferred from electronic annotation from HAMAP).
GO:0015948; Biological process: methanogenesis (inferred from electronic annotation from UniProtKB-KW).
GO:0006814; Biological process: sodium ion transport (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_01097; -; 1.
PBIL [Tree]
InterPro IPR005779; MeTrfase_D.
Graphical view of domain structure.
Pfam PF04207; MtrD; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF016552; MtrD; 1.
ProDom PD013594; Met_transD; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR01112; mtrD; 1.
ProtoNet Q8TU00.
Genome annotation databases
GeneID 1472167; -.
GenomeReviews AE010299_GR; MA_0275.
KEGG mac:MA0275; -.
NMPDR fig|188937.1.peg.274; -.
Phylogenomic databases
HOGENOM Q8TU00; -.
Genome annotation databases
CMR Q8TU00; MA_0275.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell membrane; Complete proteome; Membrane; Methanogenesis; Methyltransferase; One-carbon metabolism; Transferase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   249  249     Tetrahydromethanopterin S-methyltransferase subunit D. PRO_0000147528
TRANSMEM   9    29  21     Potential. 
TRANSMEM   47    67  21     Potential. 
TRANSMEM   75    95  21     Potential. 
TRANSMEM   138   158  21     Potential. 
TRANSMEM   183   203  21     Potential. 
TRANSMEM   224   244  21     Potential. 
Sequence information
Length: 249 AA [This is the length of the unprocessed precursor] Molecular weight: 25352 Da [This is the MW of the unprocessed precursor] CRC64: 85A9E4CAA18B808D [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIDALMANIL WLVFIIIGGV LISWSVHFVP VGGAPAAMAQ ATGIGTGTVQ LAAGAGLTGL 

        70         80         90        100        110        120 
VSAGFMMNVT DNLPLILASG AVGAMIMISV TMIVGTWVYV YGVGCVPSSA KVKYDPITKY 

       130        140        150        160        170        180 
RQDLYVSQGT EGHGLPTVSF VSGVIGGLLG GIGGALVYYS LIEVGLTAGL STGTSSGVTG 

       190        200        210        220        230        240 
HELVGIAAMF AIGIFFVNAV IPSYNIGGTI EGFHDPKWKK WPKAVISSFV ATILCAIVAV 


IAISQLGGI 

Q8TU00 in FASTA format

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