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UniProtKB/Swiss-Prot entry Q8TLM4


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PDAD1_METAC
Primary accession number Q8TLM4
Secondary accession numbers None
Integrated into Swiss-Prot on July 11, 2002
Sequence was last modified on June 1, 2002 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 45)
Name and origin of the protein
Protein name Pyruvoyl-dependent arginine decarboxylase 1
Synonyms PvlArgDC 1
EC 4.1.1.19
Contains Pyruvoyl-dependent arginine decarboxylase 1 subunit beta
Pyruvoyl-dependent arginine decarboxylase 1 subunit alpha
Gene name
Name: pdaD1
OrderedLocusNames: MA_3012
From
Methanosarcina acetivorans [TaxID: 2214] [HAMAP proteome]
Taxonomy Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 35395 / DSM 2834 / JCM 12185 / C2A;
DOI=10.1101/gr.223902; PubMed=11932238 [NCBI, ExPASy, EBI, Israel, Japan]
Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P., McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A.M., Hedderich R., Ingram-Smith C., Kuettner H.C., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I.T., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B.;
"The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity.";
Genome Res. 12:532-542(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE010299; AAM06385.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_617905.1; -.
3D structure databases
ModBase Q8TLM4.
Enzyme and pathway databases
BioCyc MACE188937:MA3012-MON; -.
Ontologies
GO
GO:0008792; Molecular function: arginine decarboxylase activity (inferred from electronic annotation from HAMAP).
GO:0006527; Biological process: arginine catabolic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_01404; -; 1.
PBIL [Tree]
InterPro IPR016105; Pyr-dep_his/arg-deCO2ase_sand.
IPR002724; Pyruvoyl-dep_arg_deCO2ase.
Graphical view of domain structure.
Gene3D G3DSA:3.50.20.10; Pyr-dep_his/arg-deCO2ase_sand; 1.
Pfam PF01862; PvlArgDC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF005216; Pyruvoyl-dep_arg_deCO2ase; 1.
ProDom PD010449; DUF44; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR00286; PvlArgDC; 1.
ProtoNet Q8TLM4.
Genome annotation databases
GeneID 1474906; -.
GenomeReviews AE010299_GR; MA_3012.
KEGG mac:MA3012; -.
NMPDR fig|188937.1.peg.2931; -.
Phylogenomic databases
HOGENOM Q8TLM4; -.
Genome annotation databases
CMR Q8TLM4; MA_3012.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Decarboxylase; Lyase; Pyruvate.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom  To Length Description FTId
CHAIN   1    44  44     Pyruvoyl-dependent arginine decarboxylase 1 subunit beta (By similarity). PRO_0000023310
CHAIN   45   165  121     Pyruvoyl-dependent arginine decarboxylase 1 subunit alpha (By similarity). PRO_0000023311
SITE   44    45  2     Cleavage (non-hydrolytic) (By similarity). 
MOD_RES   45    45        Pyruvic acid (Ser) (By similarity). 
Sequence information
Length: 165 AA [This is the length of the unprocessed precursor] Molecular weight: 18075 Da [This is the MW of the unprocessed precursor] CRC64: CE50420335EE4139 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MITKLIPRKV FFTSGVGLHS EKLESFEVSL RDAGIEKFNL VTVSSILPPN CEIVTKEEGL 

        70         80         90        100        110        120 
KELSPGEVVF CVMSRISSNE PGKTLSTSVG CALPRDISKH GYISEYHAYE ENAQDVGEHA 

       130        140        150        160 
KKLAGSMYST WTNEAPLKTF SIPRSSSVQE SGDWMTVISA AVFII 

Q8TLM4 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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