ID PAP13_ARATH Reviewed; 299 AA. AC Q8S9M1; O48521; Q84X37; Q84X38; Q84X39; Q8GY49; DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot. DT 15-MAY-2007, sequence version 2. DT 25-NOV-2008, entry version 23. DE RecName: Full=Probable plastid-lipid-associated protein 13, chloroplastic; DE AltName: Full=Fibrillin-13; DE Short=AtPGL30; DE Flags: Precursor; GN Name=PAP13; OrderedLocusNames=At2g42130; ORFNames=T24P15.4; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; OC rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX MEDLINE=20083487; PubMed=10617197; DOI=10.1038/45471; RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., RA Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., RA Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., RA Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., RA Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., RA Venter J.C.; RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis RT thaliana."; RL Nature 402:761-768(1999). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 6). RC STRAIN=cv. Columbia; RX MEDLINE=21932900; PubMed=11910074; DOI=10.1126/science.1071006; RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T., RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., RA Hayashizaki Y., Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., RA Shibata K., Shinagawa A., Shinozaki K.; RT "Functional annotation of a full-length Arabidopsis cDNA collection."; RL Science 296:141-145(2002). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). RC STRAIN=cv. Columbia; RX MEDLINE=22954850; PubMed=14593172; DOI=10.1126/science.1088305; RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., RA Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., RA Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., RA Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., RA Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., RA Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., RA Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., RA Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., RA Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., RA Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., RA Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., RA Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Empirical analysis of transcriptional activity in the Arabidopsis RT genome."; RL Science 302:842-846(2003). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3; 4 AND 5). RC STRAIN=cv. Columbia; RX PubMed=16244158; DOI=10.1104/pp.105.063479; RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., RA Monaghan E.L., Ayele M., Haas B.J., Wu H.C., Town C.D.; RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome RT 2 reveals numerous transcript variants."; RL Plant Physiol. 139:1323-1337(2005). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). RC STRAIN=cv. Columbia; RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W., RA Redman J.C., Wu H.C., Utterback T., Town C.D.; RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases. RN [6] RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY. RX PubMed=16414959; DOI=10.1074/jbc.M511939200; RA Vidi P.-A., Kanwischer M., Baginsky S., Austin J.R., Csucs G., RA Doermann P., Kessler F., Brehelin C.; RT "Tocopherol cyclase (VTE1) localization and vitamin E accumulation in RT chloroplast plastoglobule lipoprotein particles."; RL J. Biol. Chem. 281:11225-11234(2006). RN [7] RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY. RX PubMed=16461379; DOI=10.1104/pp.105.076083; RA Ytterberg A.J., Peltier J.-B., van Wijk K.J.; RT "Protein profiling of plastoglobules in chloroplasts and chromoplasts. RT A surprising site for differential accumulation of metabolic RT enzymes."; RL Plant Physiol. 140:984-997(2006). CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast, plastoglobule. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=6; CC Name=1; CC IsoId=Q8S9M1-1; Sequence=Displayed; CC Note=No experimental confirmation available; CC Name=2; CC IsoId=Q8S9M1-2; Sequence=VSP_025078, VSP_025079; CC Note=No experimental confirmation available; CC Name=3; CC IsoId=Q8S9M1-3; Sequence=VSP_025074; CC Note=No experimental confirmation available; CC Name=4; CC IsoId=Q8S9M1-4; Sequence=VSP_025074, VSP_025075; CC Note=No experimental confirmation available; CC Name=5; CC IsoId=Q8S9M1-5; Sequence=VSP_025074, VSP_025076, VSP_025077; CC Note=No experimental confirmation available; CC Name=6; CC IsoId=Q8S9M1-6; Sequence=VSP_025073; CC Note=No experimental confirmation available; CC -!- SIMILARITY: Belongs to the PAP/fibrillin family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AC002561; AAB88638.2; -; Genomic_DNA. DR EMBL; AK117864; BAC42505.1; -; mRNA. DR EMBL; AY074656; AAL69472.1; -; mRNA. DR EMBL; AY219066; AAO37153.1; -; mRNA. DR EMBL; AY219067; AAO37154.1; -; mRNA. DR EMBL; AY219068; AAO37155.1; -; mRNA. DR EMBL; AY954828; AAX55154.1; -; mRNA. DR PIR; T00923; T00923. DR RefSeq; NP_973667.2; -. DR UniGene; At.37008; -. DR GeneID; 818813; -. DR GenomeReviews; CT485783_GR; AT2G42130. DR NMPDR; fig|3702.1.peg.11358; -. DR GeneFarm; 2866; 270. DR TAIR; At2g42130; -. DR GO; GO:0010287; C:plastoglobule; IDA:TAIR. DR GO; GO:0009579; C:thylakoid; IDA:TAIR. PE 1: Evidence at protein level; KW Alternative splicing; Chloroplast; Complete proteome; Plastid; KW Transit peptide. FT TRANSIT 1 48 Chloroplast (Potential). FT CHAIN 49 299 Probable plastid-lipid-associated protein FT 13, chloroplastic. FT /FTId=PRO_0000286536. FT VAR_SEQ 1 158 Missing (in isoform 6). FT /FTId=VSP_025073. FT VAR_SEQ 1 49 Missing (in isoform 3, isoform 4 and FT isoform 5). FT /FTId=VSP_025074. FT VAR_SEQ 78 78 A -> AEQSSVCLELSNYFCPEAIYVQ (in isoform FT 4). FT /FTId=VSP_025075. FT VAR_SEQ 148 155 RFPSTLAN -> SVLIIFSS (in isoform 5). FT /FTId=VSP_025076. FT VAR_SEQ 156 299 Missing (in isoform 5). FT /FTId=VSP_025077. FT VAR_SEQ 253 270 GSFERFFMISYLDEEILI -> KLLYPFFIHLTIFRSNLH FT (in isoform 2). FT /FTId=VSP_025078. FT VAR_SEQ 271 299 Missing (in isoform 2). FT /FTId=VSP_025079. SQ SEQUENCE 299 AA; 32986 MW; E73AC3466B2F1A3D CRC64; MALIHGSVPG TSAVRLVFST SASPSRFCLN VPVVKQGWKN SCRRRVLRAM VQETVQGSPL VYAREMERLS AKESLLLALK DAGGFEALVT GKTTNMQRID VNERITSLER LNPTPRPTTS PCFEGRWNFE WFGSGSPGLL AARVIFERFP STLANLSRME ILIKDANAKA TANIKLLNSI ESKIILSSKL TVEGPLRLKE EYVEGMLETP TVIEEAVPEQ LKSALGQAAT TLQQLPALIK DTLASGLRIP LSGSFERFFM ISYLDEEILI VRDTEGVPEV LTRIETPSST VVETIEYDS //